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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:94.0RPKM
FANTOM5:269.5Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody HPA036849

 

Glial cells

Not detected  

Neuronal cells

High  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

94.0

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 94.0
Samples: 117

Max RPKM: 162.9
Min RPKM: 28
Std RPKM: 30.1
Median RPKM: 97.5
GTEX-139TT-0011-R5b-SM-5K7W8 162.9
GTEX-13G51-0011-R5a-SM-5L3EB 160.8
GTEX-T6MN-0011-R5A-SM-32QPD 154.3
GTEX-12WSC-0011-R5b-SM-5CVNS 143.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 141.6
GTEX-ZUA1-0011-R5b-SM-51MTG 136.6
GTEX-131YS-0011-R5b-SM-5K7YB 136.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 131.6
GTEX-P44H-0011-R5A-SM-2XCEX 128.5
GTEX-S7SE-0011-R5A-SM-2XCDA 128.5
GTEX-X585-0011-R5A-SM-46MVI 128.0
GTEX-UTHO-0011-R5A-SM-3GIJD 126.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 126.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 126.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 125.1
GTEX-145MH-0011-R5a-SM-5P9JT 125.1
GTEX-1399T-0011-R5b-SM-5IJDK 124.3
GTEX-N7MS-0011-R5a-SM-2HMK8 124.0
GTEX-WHSE-0011-R5A-SM-3P5ZO 123.1
GTEX-11H98-0011-R5b-SM-57WCF 123.0
GTEX-QVJO-0011-R5A-SM-2S1QM 123.0
GTEX-13X6K-0011-R5b-SM-5PNUE 122.2
GTEX-13VXU-0011-R5a-SM-5O9D7 122.1
GTEX-1313W-0011-R5b-SM-5L3EP 121.9
GTEX-WL46-0011-R5A-SM-3LK6V 121.8
GTEX-14BIM-0011-R5b-SM-5S2RM 120.5
GTEX-13X6J-0011-R5b-SM-5PNWT 119.7
GTEX-T2IS-0011-R5A-SM-32QP4 118.2
GTEX-13SLX-0011-R5a-SM-5O9BV 117.7
GTEX-WZTO-0011-R5B-SM-3NMC5 117.1
GTEX-13FXS-0011-R5b-SM-5LZYE 117.0
GTEX-11GSP-0011-R5a-SM-57WBE 116.1
GTEX-132Q8-0011-R5a-SM-5IJDM 116.1
GTEX-N7MT-0011-R5a-SM-2I3G6 115.7
GTEX-145LS-0011-R5a-SM-5SI65 114.9
GTEX-T5JC-0011-R5A-SM-32PLK 114.9
GTEX-WWYW-0011-R5A-SM-3NB3E 114.3
GTEX-11OF3-0011-R5a-SM-57WB4 113.5
GTEX-WVLH-0011-R5A-SM-3MJFW 113.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 110.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 109.6
GTEX-11NV4-0011-R5a-SM-5NQ88 109.4
GTEX-13JUV-0011-R5a-SM-5LZY5 108.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 108.9
GTEX-14ABY-0011-R5b-SM-5SI7B 108.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 107.0
GTEX-13OW6-0011-R5a-SM-5O9BK 107.0
GTEX-TSE9-0011-R5A-SM-3DB7J 104.9
GTEX-RU72-0011-R5A-SM-2TF6U 104.0
GTEX-R55E-0011-R5A-SM-2TC5N 103.1
GTEX-13NYB-0011-R5a-SM-5MR45 102.1
GTEX-PVOW-0011-R5A-SM-32PL7 102.0
GTEX-13O3O-0011-R5b-SM-5KM44 101.9
GTEX-13X6I-0011-R5a-SM-5PNWW 101.7
GTEX-13FLW-0011-R5a-SM-5LZX6 101.1
GTEX-13OVL-0011-R5b-SM-5L3FU 101.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 100.7
GTEX-12WSF-0011-R5a-SM-5HL8K 99.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 97.5
GTEX-Z93S-0011-R5b-SM-4RGNI 97.5
GTEX-13NYS-0011-R5a-SM-5MR4D 97.3
GTEX-RVPU-0011-R5A-SM-2XCAD 95.5
GTEX-OHPN-0011-R5A-SM-2I5FF 94.9
GTEX-13S7M-0011-R5b-SM-5P9HS 94.3
GTEX-13OVH-0011-R5b-SM-5KM4L 93.7
GTEX-13CZV-0011-R5a-SM-5K7XA 93.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 93.2
GTEX-12WSA-0011-R5b-SM-5GU5I 93.0
GTEX-RVPV-0011-R5A-SM-2TF69 92.4
GTEX-12WSB-0011-R5b-SM-5GU67 91.8
GTEX-13FLV-0011-R5a-SM-5LZWT 90.6
GTEX-XMD1-0011-R5A-SM-4AT47 86.1
GTEX-13OW7-0011-R5b-SM-5O9DM 85.8
GTEX-NL4W-0011-R5a-SM-2I3GD 85.6
GTEX-X4XX-0011-R5A-SM-46MWN 85.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 82.2
GTEX-13OW5-0011-R5b-SM-5L3FR 82.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 80.6
GTEX-NL3H-0011-R5a-SM-2I3GB 80.4
GTEX-ZE7O-0011-R5a-SM-57WBO 79.7
GTEX-QMR6-0011-R5A-SM-32PKT 78.7
GTEX-YFC4-0011-R5a-SM-4RGLR 76.5
GTEX-12WSD-0011-R5b-SM-5CVNG 75.9
GTEX-XOTO-0011-R5A-SM-4B657 75.6
GTEX-13JVG-0011-R5a-SM-5MR4O 74.9
GTEX-12ZZX-0011-R5a-SM-5HL89 73.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 73.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 73.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 68.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 68.1
GTEX-ZXG5-0011-R5b-SM-57WBN 66.7
GTEX-14BIN-0011-R5b-SM-5SI78 66.6
GTEX-144GO-0011-R5a-SM-5PNUR 66.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 65.8
GTEX-NPJ7-0011-R5a-SM-33HBK 63.1
GTEX-OXRN-0011-R5A-SM-2I5EF 62.3
GTEX-X261-0011-R5A-SM-3NMB4 62.0
GTEX-13CIG-0011-R5b-SM-5L3F2 59.7
GTEX-139T8-0011-R5b-SM-5J1MO 56.5
GTEX-12WSH-0011-R5b-SM-5P9F3 52.9
GTEX-ZVT3-0011-R5a-SM-51MSI 52.8
GTEX-139TS-0011-R5b-SM-5J2MZ 52.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 52.1
GTEX-13112-0011-R5b-SM-5DUV8 50.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50.5
GTEX-11WQC-0011-R5a-SM-5BC74 50.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 49.8
GTEX-YJ89-0011-R5a-SM-4V6GM 49.4
GTEX-1445S-0011-R5a-SM-5PNUS 48.5
GTEX-ZV68-0011-R5a-SM-4YCDW 48.0
GTEX-13FHP-0011-R5b-SM-5LZY2 42.0
GTEX-11UD1-0011-R5b-SM-5P9FP 39.8
GTEX-1477Z-0011-R5b-SM-5PNUO 37.9
GTEX-S7PM-0011-R5A-SM-3NM8G 37.6
GTEX-13CF2-0011-R5a-SM-5LZWS 37.5
GTEX-13NZA-0011-R5b-SM-5KM4K 30.8
GTEX-145MG-0011-R5b-SM-5S2VU 28.0
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

269.5

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 269.5
FF:10164-103B2 76 years, female 271.5
FF:10379-105H1 89 years, female 267.4

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