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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:171.0TPM
GTEx:75.9RPKM
FANTOM5:170.2Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA036849

 

Glandular cells

Medium  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

171.0

overview Male, age 65
Sample 1
TPM: 152.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 166.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 184.1
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 180.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

75.9

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 75.9
Samples: 88

Max RPKM: 115.7
Min RPKM: 56.2
Std RPKM: 13
Median RPKM: 72.8
GTEX-1192X-2526-SM-59868 115.7
GTEX-Y5LM-1626-SM-4VDTB 114.1
GTEX-117YX-0326-SM-5GICL 108.4
GTEX-WFG8-1626-SM-4LVMB 104.4
GTEX-ZF2S-1726-SM-57WFT 104.3
GTEX-XMK1-1826-SM-4B66F 103.7
GTEX-111CU-1326-SM-5NQ8L 103.6
GTEX-ZTPG-2626-SM-57WFX 100.7
GTEX-WFG7-1726-SM-4LVME 95.5
GTEX-131XG-1726-SM-5LZUR 94.5
GTEX-13111-1426-SM-5DUW3 92.7
GTEX-UPK5-2026-SM-4JBIM 92.3
GTEX-ZQUD-0926-SM-57WE3 92.2
GTEX-11NSD-1726-SM-5N9C3 89.8
GTEX-VUSG-1726-SM-4KKZL 88.7
GTEX-Y3IK-1726-SM-4YCCR 88.1
GTEX-ZC5H-2326-SM-4WAYT 85.9
GTEX-ZQG8-2526-SM-57WEQ 85.6
GTEX-WEY5-1526-SM-4LMJF 83.1
GTEX-13OVI-1926-SM-5IJCG 81.7
GTEX-145ME-0926-SM-5O9AR 80.7
GTEX-13QBU-1926-SM-5IJEW 80.2
GTEX-13O21-1026-SM-5IJDU 80.2
GTEX-12WSK-1526-SM-5CVNO 79.7
GTEX-YB5E-1526-SM-5IFIE 77.9
GTEX-13RTK-0826-SM-5Q5C6 77.7
GTEX-X15G-1426-SM-4PQZK 77.3
GTEX-ZZ64-0526-SM-5GZXM 77.1
GTEX-WQUQ-2426-SM-4MVNW 75.6
GTEX-ZYWO-1526-SM-5SIAL 75.5
GTEX-ZP4G-1626-SM-57WGD 75.4
GTEX-WRHK-1026-SM-4MVOD 75.3
GTEX-WH7G-1626-SM-4LVMY 75.1
GTEX-139YR-2226-SM-5IFFW 75.0
GTEX-131XF-1326-SM-5GCMQ 74.5
GTEX-14DAR-1426-SM-5RQIR 74.4
GTEX-133LE-1426-SM-5IFH1 74.2
GTEX-WFJO-0926-SM-4LVM2 74.0
GTEX-XUZC-1426-SM-4BRV3 74.0
GTEX-145LT-1026-SM-5LU9O 73.9
GTEX-148VJ-2226-SM-5NQ9M 73.6
GTEX-11EQ9-1326-SM-5985X 73.5
GTEX-1399R-2026-SM-5K7WN 73.2
GTEX-ZXES-1526-SM-5NQ95 72.8
GTEX-ZYFG-2026-SM-5E43Y 72.8
GTEX-XGQ4-1326-SM-4GIDU 72.5
GTEX-11DXX-1626-SM-5H11H 72.5
GTEX-14E6E-1626-SM-5RQI7 72.4
GTEX-ZLV1-1126-SM-4WWBW 72.2
GTEX-13113-1226-SM-5EGHT 72.1
GTEX-XAJ8-0526-SM-47JYK 72.0
GTEX-Z9EW-0926-SM-5CVMM 72.0
GTEX-ZPIC-2326-SM-57WDW 71.9
GTEX-13O61-1326-SM-5KM31 71.3
GTEX-11P82-0826-SM-5P9GU 71.3
GTEX-ZVZP-1826-SM-5GZXB 70.2
GTEX-ZLFU-1526-SM-4WWBT 69.9
GTEX-ZVT2-2126-SM-5NQ93 69.5
GTEX-ZEX8-1826-SM-57WBH 69.5
GTEX-ZA64-1226-SM-5HL7B 69.5
GTEX-ZTX8-0526-SM-59HLD 68.7
GTEX-ZTSS-0926-SM-59865 68.6
GTEX-VJYA-0926-SM-4KL1N 68.3
GTEX-YEC4-1726-SM-4W21E 68.0
GTEX-11P7K-1626-SM-5GU63 67.8
GTEX-13D11-0726-SM-5LZZB 67.6
GTEX-XBED-1426-SM-4AT4G 67.1
GTEX-13PL7-2626-SM-5IFH4 66.8
GTEX-Y114-1426-SM-4TT6W 66.0
GTEX-139T6-1026-SM-5IJGC 66.0
GTEX-11XUK-1426-SM-5EQMG 65.8
GTEX-ZVP2-1726-SM-5GU5P 65.0
GTEX-XXEK-1026-SM-4BRUW 64.9
GTEX-11I78-1126-SM-5A5K5 64.3
GTEX-X5EB-1626-SM-4E3IV 63.9
GTEX-YF7O-1826-SM-5IFIU 63.5
GTEX-13FTW-2026-SM-5IJE2 63.3
GTEX-11DXZ-1326-SM-5H11X 63.2
GTEX-12BJ1-1926-SM-5HL9Z 63.0
GTEX-ZPCL-1726-SM-57WEO 62.9
GTEX-1122O-1326-SM-5H11F 62.7
GTEX-13FH7-1226-SM-5IJFK 62.7
GTEX-111YS-1426-SM-5GID8 62.1
GTEX-1399S-2026-SM-5KM4B 60.6
GTEX-1399U-2126-SM-5IFEZ 58.9
GTEX-Y9LG-1626-SM-5IFHM 57.8
GTEX-11VI4-1626-SM-5EQKO 57.4
GTEX-13CF3-1226-SM-5LZXN 56.2
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

170.2

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 170.2
FF:10024-101D6 15,40,85 years, mixed 170.2

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