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LEMD2

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:28.4TPM
GTEx:14.4RPKM
FANTOM5:13.1Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Medium
 
 

Antibody staining

Antibody HPA017340

  

Adipocytes

 Low  

Fibroblasts

 Medium  
    
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA017340

  

Adipocytes

 Low  

Fibroblasts

 Medium  

Peripheral nerve

 Medium  
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

28.4
N/A Female, age 80
Sample 1
TPM: 22.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 20.1
N/A Female, age 57
Sample 3
TPM: 19.2
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 45.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 34.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

14.4

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 15.0
Samples: 350

Max RPKM: 24.9
Min RPKM: 8.3
Std RPKM: 2.5
Median RPKM: 15.1
GTEX-SN8G-0226-SM-4DM6B 24.9
GTEX-12WSA-0326-SM-5BC6I 23.4
GTEX-OXRO-0226-SM-3LK6F 21.9
GTEX-XBEC-0326-SM-4AT4M 21.8
GTEX-X8HC-0226-SM-4E3K1 21.1
GTEX-P4QT-0226-SM-3LK68 20.9
GTEX-XLM4-0226-SM-4AT4N 20.6
GTEX-13S7M-0226-SM-5S2UG 20.2
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 13.5
Samples: 227

Max RPKM: 24.1
Min RPKM: 6.4
Std RPKM: 3.4
Median RPKM: 13.1
GTEX-13IVO-2426-SM-5K7V9 24.1
GTEX-13S7M-0826-SM-5QGQX 22.7
GTEX-13O3P-0926-SM-5IFFI 21.8
GTEX-X585-2526-SM-4QAS1 21.6
GTEX-14A6H-1026-SM-5SIAZ 21.5
GTEX-132Q8-1726-SM-5EGK8 20.7
GTEX-12WSG-0426-SM-5FQSE 20.5
GTEX-12WSA-1626-SM-5EGJV 20.2
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

13.1

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 13.1
FF:10010-101C1 65,65,76 years, mixed 13.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.