Tissue expression of LEMD2 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	35.4	TPM
GTEx:	15.6	RPKM
FANTOM5:	15.7	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

High

Antibody staining	Antibody HPA017340
Squamous epithelial cells	High

ESOPHAGUS - HPA RNA-seq

Average TPM	35.4

Female, age 70

Sample 1
TPM: 30.5

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 34.1

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 41.6

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	15.6

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 15.6

Samples: 286

Max RPKM: 30.8
Min RPKM: 9.2
Std RPKM: 3.8
Median RPKM: 14.4

GTEX-ZZPT-1426-SM-5N9C5

30.8

GTEX-148VJ-1026-SM-5LU98

29.9

GTEX-144GO-2726-SM-5O9A2

26.2

GTEX-TSE9-1226-SM-4DXTM

26.1

GTEX-R45C-1226-SM-48FEE

26.0

GTEX-13W46-1926-SM-5J2MF

25.8

GTEX-139TU-1226-SM-5J2NL

25.0

GTEX-QEG4-0726-SM-4R1JL

24.8

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	15.7

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 15.7

FF:10015-101C6

68,74,75 years, mixed

15.7