We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SENP3
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA ESOPHAGUS

GENE/PROTEIN

Antibody validation


Dictionary

Esophagus

Tissue proteome

Esophagus

ESOPHAGUS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:25.4TPM
GTEx:15.2RPKM
FANTOM5:10.8Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA060290

 

Squamous epithelial cells

Medium  
 
 

ESOPHAGUS - HPA RNA-seq

Average TPM

25.4

overview Female, age 70
Sample 1
TPM: 26.2
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38
Sample 2
TPM: 26.4
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76
Sample 3
TPM: 23.6
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

15.2

GTEx sample id

RPKM

 

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 15.2
Samples: 286

Max RPKM: 29.4
Min RPKM: 7.4
Std RPKM: 3.1
Median RPKM: 14.9
GTEX-RUSQ-0826-SM-47JWW 29.4
GTEX-11DZ1-2026-SM-5A5KG 26.4
GTEX-144GO-2726-SM-5O9A2 25.8
GTEX-TMMY-1126-SM-4DXSX 25.3
GTEX-R55D-1126-SM-48FEB 24.5
GTEX-XLM4-2326-SM-4TT2D 23.2
GTEX-NPJ8-1926-SM-3MJGB 22.7
GTEX-13X6I-1026-SM-5LU4C 22.0
GTEX-145ME-0526-SM-5QGQV 21.7
GTEX-P4QS-0626-SM-3NMD1 21.7
GTEX-ZTX8-0226-SM-5E44D 21.4
GTEX-Y111-1626-SM-57WCY 21.2
GTEX-PSDG-1326-SM-48TD2 20.9
GTEX-13O1R-1326-SM-5IJF5 20.8
GTEX-T5JW-1326-SM-4DM5G 20.8
GTEX-139UW-1126-SM-5IJEJ 20.6
GTEX-RU72-0726-SM-46MUW 20.6
GTEX-UPIC-1026-SM-4IHLT 20.6
GTEX-TSE9-1226-SM-4DXTM 20.5
GTEX-OXRL-0626-SM-3NM9C 20.4
GTEX-12WSA-1426-SM-5EGJU 20.3
GTEX-ZZPT-1426-SM-5N9C5 20.2
GTEX-WOFM-0626-SM-4OOS3 19.9
GTEX-XGQ4-1526-SM-4AT6H 19.8
GTEX-QEG5-1426-SM-447AS 19.7
GTEX-146FQ-1026-SM-5LU8I 19.6
GTEX-133LE-0626-SM-5IFFJ 19.1
GTEX-1399U-1026-SM-5J1OC 19.1
GTEX-13X6H-1326-SM-5LU42 19.1
GTEX-QESD-0826-SM-47J4G 18.9
GTEX-QDVN-1026-SM-48TZA 18.8
GTEX-S3XE-0926-SM-4AD4S 18.6
GTEX-13W3W-1626-SM-5LU35 18.5
GTEX-14BMU-0926-SM-5S2QB 18.4
GTEX-PLZ5-0926-SM-3TW8L 18.3
GTEX-XUJ4-1026-SM-4BOPB 18.3
GTEX-ZAB5-0926-SM-5CVMV 18.3
GTEX-13CF3-1626-SM-5IFG9 18.2
GTEX-132Q8-1826-SM-5EGIY 18.1
GTEX-Y3I4-1226-SM-4TT8N 18.1
GTEX-ZZ64-0226-SM-5E44X 18.0
GTEX-11DXX-1126-SM-5GZZK 17.9
GTEX-13PVQ-1726-SM-5IFF3 17.8
GTEX-13S86-0826-SM-5SI6J 17.8
GTEX-146FH-1726-SM-5QGQ2 17.8
GTEX-R55E-1326-SM-48FCR 17.8
GTEX-S32W-0926-SM-4AD5X 17.8
GTEX-UJMC-0926-SM-4IHLK 17.8
GTEX-V955-1126-SM-4JBH3 17.8
GTEX-ZY6K-0626-SM-59HJL 17.8
GTEX-R3RS-1326-SM-48FE7 17.7
GTEX-WFG7-1126-SM-4LMK3 17.7
GTEX-P78B-1026-SM-3NMC4 17.6
GTEX-11DYG-1326-SM-5N9DO 17.5
GTEX-RU1J-0326-SM-46MUM 17.5
GTEX-SNOS-0626-SM-4DM5F 17.5
GTEX-11TT1-0526-SM-5P9JO 17.4
GTEX-13U4I-1126-SM-5LU3S 17.4
GTEX-VJYA-0726-SM-4KL1T 17.4
GTEX-12WSL-1526-SM-5GCP8 17.3
GTEX-U4B1-0826-SM-4DXTW 17.3
GTEX-13OVJ-1226-SM-5L3HA 17.2
GTEX-Y5V6-1026-SM-4VBS2 17.2
GTEX-ZYW4-1326-SM-5E45N 17.2
GTEX-11LCK-1726-SM-5S2OQ 17.1
GTEX-XQ3S-1126-SM-4BOPK 17.1
GTEX-144FL-2726-SM-5O98Z 17.0
GTEX-RNOR-1226-SM-48FDQ 17.0
GTEX-QVUS-0626-SM-447CC 16.9
GTEX-X4LF-0626-SM-4QASB 16.9
GTEX-XBED-1026-SM-48TCB 16.9
GTEX-OOBK-0625-SM-3LK5P 16.8
GTEX-Q2AH-0826-SM-48TZN 16.8
GTEX-U8XE-1726-SM-4E3IF 16.8
GTEX-132QS-1426-SM-5P9GE 16.7
GTEX-13O21-0626-SM-5IJDI 16.7
GTEX-14ICL-0526-SM-5RQJ6 16.7
GTEX-ZDYS-0826-SM-4WWCR 16.7
GTEX-P4QT-0626-SM-3NMCP 16.6
GTEX-12ZZW-1726-SM-5DUVD 16.5
GTEX-QLQW-0526-SM-4R1KS 16.5
GTEX-XMK1-1326-SM-4B65Q 16.5
GTEX-145MF-1426-SM-5O9B6 16.4
GTEX-139TU-1226-SM-5J2NL 16.3
GTEX-QEL4-1426-SM-447AC 16.3
GTEX-RM2N-0726-SM-48FD5 16.3
GTEX-UPK5-1226-SM-4IHL8 16.3
GTEX-WQUQ-1626-SM-4OOSH 16.3
GTEX-XUZC-0426-SM-4BOPE 16.3
GTEX-13FH7-0526-SM-5IJF8 16.2
GTEX-144GN-0626-SM-5O9B2 16.2
GTEX-X4EO-1226-SM-4QARR 16.2
GTEX-Z9EW-0526-SM-5HL8S 16.2
GTEX-QLQ7-0926-SM-447BC 16.1
GTEX-WH7G-0926-SM-4LVMJ 16.1
GTEX-ZT9X-0526-SM-5GCOP 16.1
GTEX-111YS-0926-SM-5EGGI 16.0
GTEX-11XUK-0826-SM-5GU6P 16.0
GTEX-13111-0826-SM-5LZV3 16.0
GTEX-145LT-1126-SM-5LUA1 16.0
GTEX-UJHI-0826-SM-4IHLM 16.0
GTEX-WEY5-0926-SM-4LMI4 16.0
GTEX-145MO-1426-SM-5Q5BS 15.9
GTEX-WFON-0826-SM-4LVMI 15.9
GTEX-ZVE2-1326-SM-5NQ94 15.9
GTEX-145MN-1026-SM-5NQ9G 15.8
GTEX-11NSD-1126-SM-5N9BQ 15.7
GTEX-12WSK-1126-SM-5LZV8 15.7
GTEX-TKQ1-0326-SM-4DXSM 15.7
GTEX-WFJO-0826-SM-4LVM5 15.7
GTEX-ZYY3-1526-SM-5SIA9 15.7
GTEX-1497J-2726-SM-5SI9W 15.6
GTEX-R45C-1226-SM-48FEE 15.6
GTEX-S95S-0426-SM-4B64I 15.6
GTEX-WRHK-0526-SM-4MVOF 15.6
GTEX-S4P3-0426-SM-4AD56 15.5
GTEX-U3ZM-0526-SM-4DXTB 15.5
GTEX-XV7Q-1126-SM-4BRVS 15.5
GTEX-ZXES-1126-SM-5GZXN 15.5
GTEX-11EMC-2226-SM-5A5JW 15.4
GTEX-S33H-0826-SM-4AD5Y 15.4
GTEX-XYKS-1526-SM-4BRUP 15.4
GTEX-148VJ-1026-SM-5LU98 15.3
GTEX-14E6E-0726-SM-5S2R3 15.3
GTEX-R55C-0826-SM-48FCL 15.3
GTEX-XOTO-2126-SM-4B64U 15.3
GTEX-14C38-2126-SM-5RQJO 15.2
GTEX-R53T-1126-SM-48FD4 15.2
GTEX-S4Q7-0626-SM-4AD5M 15.2
GTEX-S7SF-0926-SM-4AD4M 15.2
GTEX-Y8E4-1726-SM-5LU9G 15.2
GTEX-ZA64-0626-SM-5HL9O 15.2
GTEX-11VI4-0526-SM-5EQ48 15.1
GTEX-13QBU-1026-SM-5LU3R 15.1
GTEX-145LS-1826-SM-5LUAZ 15.1
GTEX-S341-0526-SM-4AD5U 15.1
GTEX-X585-1226-SM-46MW7 15.1
GTEX-XK95-1026-SM-4GIDV 15.1
GTEX-ZAB4-1126-SM-5HL86 15.1
GTEX-146FR-0426-SM-5SI97 15.0
GTEX-T2IS-0826-SM-4DM6L 15.0
GTEX-11I78-1526-SM-5A5K7 14.9
GTEX-139T6-0626-SM-5IFF9 14.9
GTEX-13NZB-1226-SM-5J2MW 14.9
GTEX-OIZH-0626-SM-3NB1L 14.9
GTEX-QEG4-0726-SM-4R1JL 14.9
GTEX-SUCS-0726-SM-4DM7J 14.9
GTEX-Y114-0926-SM-4TT7J 14.9
GTEX-ZGAY-1126-SM-4WWBS 14.9
GTEX-13X6K-2126-SM-5O9D4 14.8
GTEX-NFK9-1126-SM-3LK78 14.8
GTEX-U3ZH-1026-SM-4DXUZ 14.8
GTEX-Y8LW-0726-SM-5IFI1 14.8
GTEX-11EM3-0826-SM-5N9CC 14.7
GTEX-Y9LG-0626-SM-4WWDH 14.7
GTEX-111CU-0726-SM-5GZYD 14.6
GTEX-144GM-1426-SM-5LU31 14.6
GTEX-QDVJ-0726-SM-48U1W 14.6
GTEX-WFG8-1226-SM-4V6EI 14.6
GTEX-X15G-0826-SM-4PQZD 14.6
GTEX-Y5V5-1626-SM-4VDSG 14.6
GTEX-YECK-1626-SM-5IFHQ 14.6
GTEX-ZYWO-1026-SM-5E45U 14.6
GTEX-13FTW-1626-SM-5KM4N 14.5
GTEX-XBEW-1326-SM-4AT63 14.5
GTEX-YFC4-1226-SM-5LU9R 14.5
GTEX-12BJ1-1626-SM-5HL8Y 14.4
GTEX-PLZ4-1626-SM-3P618 14.4
GTEX-REY6-1326-SM-48FDO 14.4
GTEX-132AR-2226-SM-5J2NT 14.3
GTEX-13FLV-1126-SM-5J2NO 14.3
GTEX-OXRK-1326-SM-3NB1A 14.3
GTEX-WK11-1026-SM-4OOS8 14.3
GTEX-XMD2-1326-SM-4YCET 14.3
GTEX-1212Z-2126-SM-5FQTM 14.2
GTEX-131XF-0826-SM-5GICG 14.2
GTEX-13RTK-0526-SM-5S2QF 14.2
GTEX-PWCY-0726-SM-48TCS 14.2
GTEX-QCQG-0626-SM-48U21 14.2
GTEX-U3ZN-1726-SM-4DXUQ 14.2
GTEX-YF7O-0926-SM-5IFIF 14.2
GTEX-ZLV1-0526-SM-4WWD4 14.2
GTEX-P4PP-0626-SM-3NM9X 14.1
GTEX-YEC3-2526-SM-4YCDN 14.1
GTEX-11P81-0826-SM-5P9GR 14.0
GTEX-131YS-1426-SM-5IJF7 14.0
GTEX-SNMC-0526-SM-4DM69 14.0
GTEX-T6MO-0526-SM-4DM6R 14.0
GTEX-VUSG-1226-SM-4KKZF 14.0
GTEX-ZUA1-1226-SM-5NQ6O 14.0
GTEX-ZYFG-1126-SM-5GICY 14.0
GTEX-11GSP-1826-SM-5N9DQ 13.9
GTEX-1211K-0926-SM-5FQTL 13.9
GTEX-ZPU1-1426-SM-4WWFU 13.9
GTEX-131XE-1426-SM-5HL7V 13.8
GTEX-131XG-1026-SM-5GCMX 13.8
GTEX-Q2AI-0626-SM-48TZU 13.8
GTEX-ZTPG-1626-SM-5DUX2 13.8
GTEX-PVOW-1626-SM-48TC9 13.6
GTEX-V1D1-1026-SM-4JBHE 13.6
GTEX-ZPCL-1426-SM-57WEC 13.6
GTEX-11NUK-1326-SM-5P9GN 13.5
GTEX-1399Q-1126-SM-5P9JA 13.5
GTEX-147F3-0826-SM-5NQA7 13.5
GTEX-ZF3C-1626-SM-4WWB4 13.4
GTEX-ZYT6-1126-SM-5GZYR 13.4
GTEX-OIZI-1426-SM-3NB1T 13.3
GTEX-T8EM-0526-SM-4DM64 13.3
GTEX-W5WG-1626-SM-4LMKG 13.3
GTEX-ZQUD-0426-SM-57WFR 13.3
GTEX-11EQ9-0726-SM-5A5K2 13.2
GTEX-RWS6-0826-SM-47JXF 13.2
GTEX-X62O-2226-SM-46MW3 13.2
GTEX-O5YV-1026-SM-3LK72 13.1
GTEX-SE5C-1226-SM-4BRWV 13.1
GTEX-XQ8I-1526-SM-4BOOH 13.1
GTEX-ZVP2-1326-SM-57WCE 13.1
GTEX-1399S-1326-SM-5P9GH 13.0
GTEX-OIZG-1026-SM-3LK5X 13.0
GTEX-13PVR-1826-SM-5Q5CC 12.9
GTEX-P4PQ-0626-SM-3NMCU 12.9
GTEX-ZYVF-2226-SM-5GIDD 12.9
GTEX-12KS4-0926-SM-5BC5S 12.8
GTEX-13OW8-2326-SM-5L3I9 12.8
GTEX-12WSD-1826-SM-5GCOA 12.7
GTEX-R55G-1026-SM-48FDI 12.7
GTEX-Y5LM-1026-SM-4VDSQ 12.7
GTEX-ZE9C-1126-SM-4WWBD 12.7
GTEX-13OVG-0626-SM-5IFEP 12.6
GTEX-13W46-1926-SM-5J2MF 12.6
GTEX-XXEK-0326-SM-4BRVV 12.5
GTEX-11TUW-1326-SM-5EQKV 12.4
GTEX-139YR-1726-SM-5IFFK 12.4
GTEX-13FTX-0526-SM-5IFGS 12.4
GTEX-QV44-1126-SM-4R1KO 12.4
GTEX-X3Y1-1326-SM-4PQZB 12.4
GTEX-12696-1326-SM-5FQTJ 12.3
GTEX-12C56-1226-SM-5FQSU 12.2
GTEX-14E1K-1226-SM-5S2PD 12.2
GTEX-YB5E-0926-SM-4WWDQ 12.2
GTEX-ZG7Y-1126-SM-4WWEZ 12.2
GTEX-117YX-1626-SM-5GZZG 12.1
GTEX-X4XY-1726-SM-46MVO 12.1
GTEX-11P82-0526-SM-5986P 12.0
GTEX-13D11-1926-SM-5IFGB 12.0
GTEX-13G51-0926-SM-5IFFU 12.0
GTEX-N7MT-0326-SM-48TDP 12.0
GTEX-PWN1-0626-SM-48TDT 12.0
GTEX-ZF29-1326-SM-4WWB6 12.0
GTEX-11ZTS-2626-SM-5EGIC 11.9
GTEX-14DAQ-1426-SM-5RQJD 11.8
GTEX-PLZ6-0526-SM-3P61C 11.8
GTEX-12ZZX-1326-SM-5DUWI 11.7
GTEX-1399R-0826-SM-5IJEL 11.7
GTEX-145LV-1326-SM-5S2QI 11.7
GTEX-ZVT2-1326-SM-5E45H 11.7
GTEX-13OVI-2626-SM-5KM4T 11.6
GTEX-14AS3-0626-SM-5QGQD 11.6
GTEX-TML8-1526-SM-4DXUX 11.4
GTEX-WVLH-1426-SM-4MVNX 11.4
GTEX-ZTSS-0626-SM-59867 11.4
GTEX-11DXZ-1226-SM-5H11L 11.2
GTEX-11ZU8-1526-SM-5EGHX 11.2
GTEX-14BIN-2726-SM-5RQIE 11.2
GTEX-T5JC-1726-SM-4DM6U 10.9
GTEX-13O3Q-0826-SM-5IFGF 10.8
GTEX-RVPV-0526-SM-47JYL 10.8
GTEX-ZF2S-1226-SM-4WWAX 10.8
GTEX-13QJ3-1726-SM-5RQK9 10.7
GTEX-12ZZY-1426-SM-5N9EI 10.6
GTEX-13FHO-1726-SM-5IFGM 10.6
GTEX-RN64-1026-SM-48FDX 10.6
GTEX-YJ89-1526-SM-5P9IR 10.5
GTEX-1122O-1726-SM-5GICM 10.3
GTEX-RTLS-1126-SM-46MUQ 10.3
GTEX-14H4A-1626-SM-5SI69 10.1
GTEX-OXRN-1726-SM-3NM9B 10.1
GTEX-ZC5H-1326-SM-5HL7E 9.8
GTEX-11ONC-1526-SM-5GU6S 9.7
GTEX-OXRP-0926-SM-48TC1 9.7
GTEX-Y3IK-1126-SM-51MSV 9.6
GTEX-11P7K-1326-SM-5BC5G 9.3
GTEX-ZT9W-1326-SM-51MTB 9.3
GTEX-11DXY-1426-SM-5N9CN 8.1
GTEX-117YW-1926-SM-5H121 7.9
GTEX-14A6H-1326-SM-5NQBC 7.4
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

10.8

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 10.8
FF:10015-101C6 68,74,75 years, mixed 10.8

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.