Tissue expression of VANGL2 - Staining in esophagus

ESOPHAGUS - Expression summary

RNA expression

HPA:	6.6	TPM
GTEx:	8.8	RPKM
FANTOM5:	11.8	Tags Per Million

ESOPHAGUS - Annotated protein expression

Antibody staining	Antibody HPA027043
Squamous epithelial cells	Not detected

ESOPHAGUS - HPA RNA-seq

Average TPM	6.6

Female, age 70

Sample 1
TPM: 6.7

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 7.2

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 5.9

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	8.8

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 8.8

Samples: 286

Max RPKM: 18.5
Min RPKM: 2.2
Std RPKM: 2.9
Median RPKM: 8.4

GTEX-PSDG-1326-SM-48TD2

18.5

GTEX-139TU-1226-SM-5J2NL

18.3

GTEX-132Q8-1826-SM-5EGIY

18.1

GTEX-12ZZX-1326-SM-5DUWI

17.9

GTEX-ZF3C-1626-SM-4WWB4

17.3

GTEX-ZVE2-1326-SM-5NQ94

17.2

GTEX-Y111-1626-SM-57WCY

16.9

GTEX-UPK5-1226-SM-4IHL8

16.8

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	11.8

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 11.8

FF:10015-101C6

68,74,75 years, mixed

11.8