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TISSUE ATLAS PRIMARY DATA SPLEEN
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:24.1TPM
GTEx:52.0RPKM
FANTOM5:53.0Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Low
Cells in white pulp:Not detected
 

Antibody staining

Antibody HPA029894

 

Cells in red pulp

Low  

Cells in white pulp

Not detected  
 
 
 

SPLEEN - HPA RNA-seq

Average TPM

24.1

overview Female, age 60
Sample 1
TPM: 21.5
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 33.9
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 20.6
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 24.5
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 19.7
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

52.0

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 52.0
Samples: 104

Max RPKM: 81.2
Min RPKM: 25.3
Std RPKM: 10.1
Median RPKM: 52
GTEX-131XE-1126-SM-5EGHW 81.2
GTEX-13S86-0126-SM-5S2PI 76.3
GTEX-ZVZP-0726-SM-59HKA 73.3
GTEX-P4QS-0926-SM-48TBS 72.5
GTEX-S3XE-0626-SM-4AD6B 71.8
GTEX-UJHI-0126-SM-4IHLP 70.5
GTEX-XMK1-0126-SM-4B65F 68.0
GTEX-ZDTT-1026-SM-5KM19 67.5
GTEX-Y5LM-0326-SM-4VBRN 65.6
GTEX-VJYA-0126-SM-4KL1P 64.3
GTEX-11NSD-0426-SM-5N9CR 64.1
GTEX-12BJ1-0726-SM-5EGGF 63.8
GTEX-131XG-0426-SM-5IFGD 63.3
GTEX-144GN-2126-SM-5O99D 62.8
GTEX-OIZH-0926-SM-48TBR 62.6
GTEX-U4B1-0526-SM-4DXTK 62.5
GTEX-QCQG-0226-SM-48U28 62.0
GTEX-XAJ8-0126-SM-47JYG 62.0
GTEX-139YR-0426-SM-5IFFV 61.3
GTEX-XGQ4-0126-SM-4AT4H 61.0
GTEX-ZLFU-0526-SM-4WWBN 60.3
GTEX-YFCO-0926-SM-5LUA5 59.6
GTEX-11XUK-0426-SM-5EQML 59.4
GTEX-ZAB5-0526-SM-5CVMU 58.4
GTEX-Q2AH-0226-SM-48U1I 57.7
GTEX-12WSJ-0526-SM-5GCOZ 57.5
GTEX-13PVR-0326-SM-5RQJY 57.2
GTEX-117YX-2126-SM-5GIEL 56.9
GTEX-12WSN-0126-SM-5DUX5 56.9
GTEX-13X6H-0726-SM-5Q5BX 56.6
GTEX-ZLWG-0426-SM-4WWFA 56.3
GTEX-147F3-0126-SM-5NQBJ 55.9
GTEX-XV7Q-0126-SM-4BRVK 55.8
GTEX-11EQ9-0426-SM-5A5JY 55.7
GTEX-RUSQ-0126-SM-47JWV 55.5
GTEX-13111-0126-SM-5EGHO 54.8
GTEX-W5WG-0626-SM-4SOID 54.8
GTEX-ZPU1-1026-SM-4YCEQ 54.8
GTEX-QV44-0126-SM-4R1KH 54.7
GTEX-11LCK-0126-SM-5A5M5 54.5
GTEX-Y3I4-0126-SM-4TT26 54.3
GTEX-YB5K-1926-SM-4VDT4 54.1
GTEX-OOBJ-0926-SM-48TDO 53.8
GTEX-XPVG-0626-SM-4B65B 53.8
GTEX-WFON-0126-SM-4LVM9 53.0
GTEX-UPK5-1626-SM-4JBHI 52.6
GTEX-WHWD-0126-SM-4OORS 52.6
GTEX-13PL7-1126-SM-5MR5O 52.4
GTEX-T5JW-0126-SM-4DM6K 52.3
GTEX-XUJ4-0226-SM-4BOP8 52.2
GTEX-XXEK-0126-SM-4BRVU 52.2
GTEX-PLZ6-0126-SM-48TC6 52.1
GTEX-1399S-0226-SM-5IFFG 52.0
GTEX-XQ8I-1726-SM-4BOQB 51.4
GTEX-1122O-0526-SM-5N9DM 51.1
GTEX-ZYWO-0226-SM-5GZX3 50.8
GTEX-R55G-0226-SM-48FEI 50.6
GTEX-U3ZH-0126-SM-4DXUK 50.4
GTEX-ZVP2-0526-SM-51MSC 50.4
GTEX-13VXT-1326-SM-5LU3Y 49.6
GTEX-11VI4-0126-SM-5GU6Z 49.5
GTEX-ZV6S-0826-SM-5NQ6Z 49.5
GTEX-QV31-0126-SM-447BP 49.3
GTEX-Q734-0226-SM-48U1A 49.0
GTEX-1211K-0426-SM-5FQTP 48.7
GTEX-QLQW-0126-SM-447BK 48.7
GTEX-YB5E-0426-SM-5IFHR 48.6
GTEX-ZP4G-0326-SM-4YCEF 48.5
GTEX-ZYFG-0726-SM-5GIDX 48.1
GTEX-ZZPU-0126-SM-5E446 47.9
GTEX-S4Z8-0226-SM-4AD5K 47.5
GTEX-X3Y1-0126-SM-4PQZA 47.4
GTEX-QDVN-0526-SM-48TZ4 47.3
GTEX-PW2O-0126-SM-48TC8 47.2
GTEX-Z9EW-0726-SM-5HL9H 47.0
GTEX-X4LF-0226-SM-4QAS8 46.5
GTEX-132QS-0226-SM-5IFFZ 46.4
GTEX-POMQ-0126-SM-48TD6 45.7
GTEX-14DAR-0326-SM-5S2PS 45.5
GTEX-13CF3-0226-SM-5J1NW 45.3
GTEX-U3ZN-0126-SM-4DXUM 45.3
GTEX-P4PP-0926-SM-48TBZ 45.1
GTEX-YEC4-0126-SM-4W21T 45.0
GTEX-14E6E-1226-SM-5S2R5 44.4
GTEX-X585-1826-SM-4QAS3 44.4
GTEX-13FH7-1326-SM-5IFG8 44.3
GTEX-145MN-0126-SM-5RQHY 44.3
GTEX-QMRM-0226-SM-4R1K7 43.6
GTEX-139T6-0226-SM-5IFGZ 43.0
GTEX-146FR-1926-SM-5NQA6 42.5
GTEX-O5YT-0926-SM-48TDG 42.4
GTEX-11P7K-0426-SM-5BC5H 41.3
GTEX-146FQ-0626-SM-5LU9U 41.0
GTEX-13N11-0126-SM-5KM2Z 40.3
GTEX-11P81-1326-SM-5GU5S 39.8
GTEX-11DXX-0726-SM-5H12X 38.6
GTEX-1399R-0226-SM-5IJGG 38.3
GTEX-Y8LW-0126-SM-4VBS1 37.0
GTEX-13U4I-1626-SM-5IFFR 34.5
GTEX-12WSK-0126-SM-5GCO7 33.9
GTEX-PX3G-0926-SM-48U12 33.5
GTEX-Y114-0726-SM-4TT6U 28.6
GTEX-Y3IK-0126-SM-4WWE9 26.7
GTEX-12WSG-0926-SM-5EGIH 25.3
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

53.0

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 53.0
FF:10025-101D7 39,50,70 years, male 53.0

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