Expression of SCNM1 in cancer - Summary - The Human Protein Atlas

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SCNM1

TISSUE

CELL

CANCER

CANCER ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

CANCER ATLAS

Gene description

Sodium channel modifier 1

Protein class

Predicted intracellular proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Liver cancer

STAINING SUMMARY

HPA052439

GENE INFORMATION
Gene name	SCNM1 (HGNC Symbol)
Synonyms	MGC3180
Description	Sodium channel modifier 1 (HGNC Symbol)
Entrez gene summary	SCNM1 is a zinc finger protein and putative splicing factor. In mice, Scnm1 modifies phenotypic expression of Scn8a (MIM 600702) mutations (Buchner et al., 2003 [PubMed 12920299]).[supplied by OMIM, Oct 2009]
Chromosome	1
Cytoband	q21.3
Chromosome location (bp)	151156664 - 151170297
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000163156 (version 83.38)
Entrez gene	79005
UniProt	Q9BWG6 (UniProt - Evidence at protein level)
neXtProt	NX_Q9BWG6
Antibodypedia	SCNM1 antibodies

PROTEIN BROWSER

SCNM1-001	SCNM1-004	SCNM1-007

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
SCNM1-001 ENSP00000357901 ENST00000368905	Q9BWG6 [Direct mapping] Sodium channel modifier 1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0005730 [nucleolus] GO:0006397 [mRNA processing] GO:0008380 [RNA splicing] GO:0016607 [nuclear speck] GO:0019899 [enzyme binding] GO:0046872 [metal ion binding] Show all	230 aa 25.9 kDa	No	0
SCNM1-004 ENSP00000357898 ENST00000368902	Q9BWG6 [Direct mapping] Sodium channel modifier 1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0005730 [nucleolus] GO:0006397 [mRNA processing] GO:0008380 [RNA splicing] GO:0016607 [nuclear speck] GO:0019899 [enzyme binding] GO:0046872 [metal ion binding] Show all	195 aa 21.9 kDa	No	0
SCNM1-007 ENSP00000473282 ENST00000602841	Q9BWG6 [Direct mapping] Sodium channel modifier 1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0005730 [nucleolus] GO:0006397 [mRNA processing] GO:0008380 [RNA splicing] GO:0016607 [nuclear speck] GO:0019899 [enzyme binding] GO:0046872 [metal ion binding] Show all	195 aa 21.9 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.