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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:14.4TPM
GTEx:10.9RPKM
FANTOM5:23.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA023689

  

Fibroblasts

 Low  

Peripheral nerve

 Low  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Low
 

Antibody staining

Antibody HPA023689

  

Adipocytes

 Medium  

Fibroblasts

 Low  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

14.4
N/A Female, age 80
Sample 1
TPM: 20.0
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 11.0
N/A Female, age 57
Sample 3
TPM: 11.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 18.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 11.0
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

10.9

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 10.7
Samples: 350

Max RPKM: 18.4
Min RPKM: 4.1
Std RPKM: 2.2
Median RPKM: 10.7
GTEX-ZXES-2026-SM-5NQ6R 18.4
GTEX-X638-0226-SM-47JZ9 16.2
GTEX-QV44-1825-SM-447CF 16.0
GTEX-X88G-0226-SM-4GIE4 15.9
GTEX-PX3G-0226-SM-3NB2C 15.5
GTEX-R55G-2426-SM-2TC5I 15.4
GTEX-13O3P-0226-SM-5KM3Z 15.2
GTEX-Q2AI-1426-SM-2S1P5 15.1
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 11.1
Samples: 227

Max RPKM: 25
Min RPKM: 2.8
Std RPKM: 3.3
Median RPKM: 10.8
GTEX-13IVO-2426-SM-5K7V9 25.0
GTEX-13PDP-1226-SM-5K7TW 19.3
GTEX-13S86-0926-SM-5SI6I 19.0
GTEX-ZYFC-1826-SM-5GZZA 18.4
GTEX-13NZ9-2026-SM-5KM1U 18.2
GTEX-14AS3-0426-SM-5QGQK 18.0
GTEX-13G51-0526-SM-5IJCQ 17.3
GTEX-WHWD-0826-SM-3LK6R 17.2
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

23.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 23.8
FF:10010-101C1 65,65,76 years, mixed 23.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.