We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PYGO2
  • premium

    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:18.5TPM
GTEx:13.0RPKM
FANTOM5:40.4Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Glandular cells:Low
Myoepithelial cells:Low
 

Antibody staining

Antibody HPA023689

 

Adipocytes

Low  

Glandular cells

Low  

Myoepithelial cells

Low  
 
 
 

BREAST - HPA RNA-seq

Average TPM

18.5

overview Female, age 52
Sample 1
TPM: 13.5
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 14.5
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 31.7
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 14.4
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

13.0

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 13.0
Samples: 214

Max RPKM: 21.6
Min RPKM: 5.9
Std RPKM: 3.2
Median RPKM: 12.8
GTEX-13NZ9-1026-SM-5MR5K 21.6
GTEX-XUZC-1626-SM-4BRVP 21.2
GTEX-QEG5-0726-SM-4R1JQ 20.7
GTEX-T5JC-2126-SM-32PMO 20.7
GTEX-UPK5-2326-SM-3P5Z8 20.1
GTEX-145LT-0726-SM-5S2VM 19.6
GTEX-QEL4-2126-SM-447AE 19.6
GTEX-13NZB-2126-SM-5MR4Y 19.4
GTEX-12ZZX-1126-SM-5EGKB 19.3
GTEX-YFC4-1426-SM-5IFJG 19.3
GTEX-ZC5H-2626-SM-5J2MG 19.1
GTEX-R53T-1526-SM-48FEK 18.8
GTEX-ZYT6-0126-SM-5E45J 18.7
GTEX-11P7K-0726-SM-5EGKX 18.5
GTEX-U3ZH-1426-SM-4DXSR 18.4
GTEX-S33H-0326-SM-4AD6N 18.3
GTEX-ZF2S-2026-SM-5E461 18.3
GTEX-VUSG-2226-SM-4KKZO 17.8
GTEX-ZY6K-1626-SM-5GZWV 17.7
GTEX-11NSD-0926-SM-5N9DR 17.5
GTEX-X15G-1626-SM-3NMB3 17.5
GTEX-14ABY-2126-SM-5QGQZ 17.3
GTEX-11TT1-2126-SM-5GU5Y 17.2
GTEX-11I78-2226-SM-5PNYA 17.1
GTEX-13FTY-2226-SM-5J1ND 17.1
GTEX-ZTX8-1226-SM-4YCE9 17.0
GTEX-SIU7-1626-SM-4BRUK 16.9
GTEX-XQ3S-1326-SM-4BOPQ 16.7
GTEX-13PL6-2926-SM-5L3I2 16.6
GTEX-UJHI-1426-SM-3DB9C 16.6
GTEX-Y8E4-1626-SM-5S2MW 16.6
GTEX-TKQ2-1826-SM-33HB2 16.5
GTEX-13S86-1226-SM-5S2OA 16.4
GTEX-PSDG-1626-SM-48TCQ 16.4
GTEX-WYVS-1726-SM-3NMAY 16.3
GTEX-XQ8I-2426-SM-4WAXY 16.3
GTEX-ZVTK-0326-SM-51MRR 16.3
GTEX-13CF2-2026-SM-5K7VI 16.2
GTEX-T6MN-0726-SM-32PML 15.9
GTEX-133LE-1726-SM-5K7VQ 15.8
GTEX-13W3W-1226-SM-5LU4H 15.8
GTEX-Y111-2026-SM-4SOJA 15.8
GTEX-S4UY-0726-SM-4AD6X 15.7
GTEX-13D11-1026-SM-5IJFB 15.6
GTEX-U3ZN-1926-SM-4DXSG 15.6
GTEX-ZV7C-1826-SM-5NQ83 15.6
GTEX-13OW5-2226-SM-5L3HC 15.5
GTEX-1399U-1826-SM-5PNZ1 15.3
GTEX-TML8-1226-SM-32QON 15.3
GTEX-ZVT2-1826-SM-5NQ8W 15.3
GTEX-11PRG-0826-SM-5EQ6A 15.2
GTEX-S341-1526-SM-4AD6K 15.2
GTEX-14AS3-1626-SM-5S2OY 14.9
GTEX-R55F-1726-SM-2TF4R 14.9
GTEX-XGQ4-0926-SM-4AT4U 14.9
GTEX-XYKS-1326-SM-4BRUN 14.9
GTEX-ZXES-0826-SM-5E43C 14.9
GTEX-12WSN-1326-SM-5GCNT 14.7
GTEX-UTHO-1026-SM-3GAF7 14.7
GTEX-WXYG-2226-SM-4E3IM 14.6
GTEX-132AR-0826-SM-5EGK6 14.5
GTEX-SE5C-2126-SM-4BRUJ 14.5
GTEX-111YS-1926-SM-5GICC 14.4
GTEX-11ZUS-0826-SM-5FQUY 14.4
GTEX-YEC3-1026-SM-5IFI5 14.4
GTEX-131YS-0626-SM-5EGKL 14.3
GTEX-139T8-0826-SM-5L3DE 14.3
GTEX-ZU9S-1926-SM-5NQBP 14.3
GTEX-144GL-2026-SM-5LU3O 14.2
GTEX-S32W-2026-SM-4AD6E 14.2
GTEX-T6MO-0326-SM-32QOK 14.2
GTEX-XMK1-1126-SM-4IHJ8 14.2
GTEX-11EMC-2026-SM-5A5JV 14.1
GTEX-QDT8-0626-SM-48TYW 14.1
GTEX-RWS6-1926-SM-47JXY 14.1
GTEX-Y5V6-2126-SM-4WWFX 14.1
GTEX-TMMY-0726-SM-33HBE 14.0
GTEX-YFCO-1826-SM-4W1YH 14.0
GTEX-11GS4-2126-SM-5A5KR 13.9
GTEX-11WQC-1726-SM-5GU4W 13.8
GTEX-146FH-0826-SM-5SI8T 13.8
GTEX-Q2AG-0326-SM-48U1O 13.8
GTEX-RU72-0626-SM-46MUI 13.8
GTEX-1269C-2426-SM-5FQSN 13.7
GTEX-S4Q7-1126-SM-4AD6R 13.7
GTEX-11WQK-2426-SM-5GU5C 13.6
GTEX-Y3IK-2326-SM-4WWDT 13.6
GTEX-WYBS-0926-SM-3NM94 13.5
GTEX-XOT4-0726-SM-4GIAW 13.5
GTEX-ZZPU-0626-SM-5E43T 13.5
GTEX-147F4-2826-SM-5NQBN 13.4
GTEX-XV7Q-2326-SM-4BRVZ 13.4
GTEX-1211K-1926-SM-5EQLB 13.3
GTEX-139TU-0626-SM-5KM3X 13.3
GTEX-11EM3-1326-SM-5N9C6 13.2
GTEX-11P81-1926-SM-5BC53 13.2
GTEX-RUSQ-2026-SM-4GIAK 13.2
GTEX-WYJK-1326-SM-3NB2T 13.2
GTEX-1192X-2326-SM-5987X 13.1
GTEX-11DXW-0626-SM-5N9ER 13.1
GTEX-11LCK-2426-SM-5HL5F 13.1
GTEX-XUW1-2326-SM-4BOO5 13.1
GTEX-YB5K-1626-SM-5IFIN 13.1
GTEX-1314G-1226-SM-5BC6D 12.9
GTEX-13N11-1726-SM-5J1OJ 12.9
GTEX-ZAJG-0626-SM-5HL8X 12.9
GTEX-13NZ8-0126-SM-5IJCT 12.8
GTEX-VJWN-0726-SM-3GIJ8 12.8
GTEX-ZPIC-1126-SM-5BC7F 12.8
GTEX-11EI6-0626-SM-5985T 12.7
GTEX-145MN-1926-SM-5SIAI 12.7
GTEX-13QIC-2326-SM-5LU5N 12.6
GTEX-ZYFC-0826-SM-5E44K 12.5
GTEX-T2YK-2226-SM-32QPT 12.4
GTEX-X4EP-2926-SM-3P5YQ 12.4
GTEX-ZEX8-2226-SM-57WC6 12.4
GTEX-ZYWO-2326-SM-5GZY4 12.4
GTEX-XMD1-0826-SM-4AT52 12.3
GTEX-ZVE2-1226-SM-5NQ8R 12.2
GTEX-QMRM-1626-SM-4R1KV 12.1
GTEX-XBED-1626-SM-47JYN 12.1
GTEX-Y8LW-1626-SM-5IFHX 12.1
GTEX-ZA64-1526-SM-5CVMD 12.1
GTEX-ZLV1-1426-SM-4WWES 12.1
GTEX-11ONC-2126-SM-5HL6E 12.0
GTEX-11ZTT-2326-SM-5EQLG 12.0
GTEX-XUJ4-1926-SM-4BOOV 12.0
GTEX-1117F-2826-SM-5GZXL 11.9
GTEX-T5JW-2026-SM-4DM63 11.9
GTEX-Y3I4-1526-SM-4TT7K 11.9
GTEX-Y5LM-1726-SM-4VDSX 11.9
GTEX-Y5V5-2126-SM-4WWFO 11.9
GTEX-ZDTT-2126-SM-5S2OJ 11.9
GTEX-ZZ64-1226-SM-5E43R 11.9
GTEX-R55D-0826-SM-48FEA 11.8
GTEX-11DXZ-1926-SM-5GZZL 11.7
GTEX-13O3P-0826-SM-5L3DH 11.7
GTEX-ZDYS-1126-SM-5K7UB 11.7
GTEX-ZF29-1926-SM-5S2P1 11.7
GTEX-13FTW-1426-SM-5LZWZ 11.6
GTEX-QVJO-1826-SM-447C9 11.6
GTEX-Y9LG-1426-SM-5IFJZ 11.6
GTEX-11P82-1326-SM-5HL62 11.4
GTEX-TKQ1-0226-SM-33HB5 11.4
GTEX-12KS4-0126-SM-5Q5A5 11.3
GTEX-13FHO-0826-SM-5L3E8 11.3
GTEX-XMD2-0926-SM-4WWEF 11.3
GTEX-ZQUD-1926-SM-51MSA 11.3
GTEX-13CF3-2126-SM-5IFJP 11.2
GTEX-13FTX-1126-SM-5N9EN 11.2
GTEX-117YX-1426-SM-5H12H 11.0
GTEX-ZTTD-1026-SM-51MRD 11.0
GTEX-11EQ9-1826-SM-5Q5AJ 10.9
GTEX-13O61-1826-SM-5KM4I 10.9
GTEX-WY7C-2726-SM-3NB3P 10.8
GTEX-ZT9W-2026-SM-51MRA 10.8
GTEX-ZWKS-2826-SM-5NQ74 10.8
GTEX-145ME-1526-SM-5Q5F2 10.7
GTEX-11DZ1-0326-SM-5N9BN 10.6
GTEX-S4P3-1326-SM-4AD6V 10.6
GTEX-W5X1-2326-SM-3GIL6 10.6
GTEX-YB5E-1726-SM-5IFJ3 10.6
GTEX-ZQG8-0726-SM-5P9H9 10.6
GTEX-14E6E-1326-SM-5S2NR 10.5
GTEX-U412-1826-SM-4DXTJ 10.4
GTEX-145MO-0826-SM-5NQBL 10.3
GTEX-R3RS-0626-SM-48FE1 10.3
GTEX-ZV6S-1826-SM-5NQ8D 10.3
GTEX-ZVZQ-0826-SM-51MRF 10.3
GTEX-1122O-1226-SM-5H113 10.2
GTEX-ZAB4-2526-SM-5HL8M 10.2
GTEX-11NV4-2026-SM-5N9DG 10.1
GTEX-132NY-0826-SM-5K7Y7 10.1
GTEX-131XW-0726-SM-5EGK3 10.0
GTEX-WRHU-0326-SM-3MJFY 10.0
GTEX-132Q8-1426-SM-5EGK7 9.9
GTEX-X261-0626-SM-3NMD9 9.9
GTEX-ZUA1-1526-SM-59HLS 9.9
GTEX-13113-1726-SM-5GCOO 9.7
GTEX-13W46-0826-SM-5LU3H 9.6
GTEX-12WSB-0626-SM-59HJO 9.4
GTEX-WI4N-1426-SM-3LK7H 9.4
GTEX-ZLFU-2126-SM-4WWEV 9.4
GTEX-12BJ1-1826-SM-5HL9N 9.3
GTEX-13O3Q-2226-SM-5KM4O 9.3
GTEX-REY6-2426-SM-48FF5 9.3
GTEX-139T6-1626-SM-5PNYZ 9.2
GTEX-13OW8-0226-SM-5K7UP 8.9
GTEX-12WSM-1726-SM-5BC6J 8.8
GTEX-X4XY-0926-SM-4E3JD 8.8
GTEX-Y114-2026-SM-4TT7L 8.8
GTEX-ZF3C-2326-SM-5S2MZ 8.8
GTEX-13O3O-0826-SM-5K7WE 8.7
GTEX-U8XE-0826-SM-4E3J1 8.7
GTEX-WOFL-0826-SM-3MJG1 8.6
GTEX-YJ8O-2226-SM-5IFHW 8.6
GTEX-S7SE-0826-SM-4AT4D 8.5
GTEX-11DXY-2326-SM-5GICW 8.4
GTEX-11O72-2126-SM-5N9FO 8.4
GTEX-WFON-1826-SM-3GILG 8.3
GTEX-11TUW-1826-SM-5BC5D 8.1
GTEX-1313W-0826-SM-5EQ4T 8.1
GTEX-11GSO-1926-SM-5A5K3 8.0
GTEX-117XS-1926-SM-5GICO 7.9
GTEX-11OF3-1926-SM-59889 7.9
GTEX-12WSK-2226-SM-5GCO5 7.9
GTEX-T2IS-1526-SM-32QPR 7.9
GTEX-ZDXO-0126-SM-5S2ND 7.9
GTEX-144GM-0926-SM-5O994 7.8
GTEX-13PVQ-1026-SM-5KM3M 7.4
GTEX-14753-2426-SM-5LU8U 6.8
GTEX-13N1W-0626-SM-5MR4U 6.7
GTEX-ZYW4-0826-SM-5GIDG 6.6
GTEX-ZVT4-1026-SM-57WC4 5.9
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

40.4

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 40.4
FF:10080-102A8 77 years, female 40.4

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.