We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ANKZF1
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:9.3RPKM
FANTOM5:56.3Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody HPA035208

 

Glial cells

Not detected  

Neuronal cells

Medium  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

9.3

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 9.3
Samples: 117

Max RPKM: 21.8
Min RPKM: 2.5
Std RPKM: 3.3
Median RPKM: 9.5
GTEX-XMD1-0011-R5A-SM-4AT47 21.8
GTEX-132Q8-0011-R5a-SM-5IJDM 18.5
GTEX-X4XX-0011-R5A-SM-46MWN 17.9
GTEX-QMR6-0011-R5A-SM-32PKT 15.2
GTEX-X585-0011-R5A-SM-46MVI 15.2
GTEX-QVJO-0011-R5A-SM-2S1QM 14.2
GTEX-14BIM-0011-R5b-SM-5S2RM 13.6
GTEX-13OW6-0011-R5a-SM-5O9BK 13.2
GTEX-12WSF-0011-R5a-SM-5HL8K 13.0
GTEX-13FXS-0011-R5b-SM-5LZYE 13.0
GTEX-13S7M-0011-R5b-SM-5P9HS 13.0
GTEX-UTHO-0011-R5A-SM-3GIJD 13.0
GTEX-13X6K-0011-R5b-SM-5PNUE 12.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 12.8
GTEX-13X6I-0011-R5a-SM-5PNWW 12.7
GTEX-WL46-0011-R5A-SM-3LK6V 12.7
GTEX-13G51-0011-R5a-SM-5L3EB 12.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 12.5
GTEX-13JUV-0011-R5a-SM-5LZY5 12.4
GTEX-WVLH-0011-R5A-SM-3MJFW 12.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 12.0
GTEX-145MH-0011-R5a-SM-5P9JT 12.0
GTEX-PVOW-0011-R5A-SM-32PL7 11.9
GTEX-WWYW-0011-R5A-SM-3NB3E 11.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 11.9
GTEX-13NYS-0011-R5a-SM-5MR4D 11.8
GTEX-RVPV-0011-R5A-SM-2TF69 11.8
GTEX-13OVH-0011-R5b-SM-5KM4L 11.7
GTEX-WZTO-0011-R5B-SM-3NMC5 11.7
GTEX-11GSP-0011-R5a-SM-57WBE 11.5
GTEX-1399T-0011-R5b-SM-5IJDK 11.4
GTEX-N7MT-0011-R5a-SM-2I3G6 11.4
GTEX-N7MS-0011-R5a-SM-2HMK8 11.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 11.1
GTEX-131YS-0011-R5b-SM-5K7YB 11.0
GTEX-OHPN-0011-R5A-SM-2I5FF 11.0
GTEX-WHSE-0011-R5A-SM-3P5ZO 11.0
GTEX-13FLW-0011-R5a-SM-5LZX6 10.9
GTEX-13NYB-0011-R5a-SM-5MR45 10.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 10.9
GTEX-11NV4-0011-R5a-SM-5NQ88 10.5
GTEX-13VXU-0011-R5a-SM-5O9D7 10.5
GTEX-13FLV-0011-R5a-SM-5LZWT 10.4
GTEX-T6MN-0011-R5A-SM-32QPD 10.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 10.3
GTEX-P44H-0011-R5A-SM-2XCEX 10.3
GTEX-13SLX-0011-R5a-SM-5O9BV 10.1
GTEX-TSE9-0011-R5A-SM-3DB7J 10.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 9.9
GTEX-139TS-0011-R5b-SM-5J2MZ 9.9
GTEX-13O3O-0011-R5b-SM-5KM44 9.9
GTEX-S7SE-0011-R5A-SM-2XCDA 9.9
GTEX-XOTO-0011-R5A-SM-4B657 9.9
GTEX-R55E-0011-R5A-SM-2TC5N 9.8
GTEX-13OVL-0011-R5b-SM-5L3FU 9.7
GTEX-13OW7-0011-R5b-SM-5O9DM 9.7
GTEX-RVPU-0011-R5A-SM-2XCAD 9.6
GTEX-1313W-0011-R5b-SM-5L3EP 9.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 9.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 9.5
GTEX-12WSD-0011-R5b-SM-5CVNG 9.2
GTEX-RU72-0011-R5A-SM-2TF6U 9.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 9.1
GTEX-14ABY-0011-R5b-SM-5SI7B 9.0
GTEX-ZUA1-0011-R5b-SM-51MTG 9.0
GTEX-13OW5-0011-R5b-SM-5L3FR 8.9
GTEX-YFC4-0011-R5a-SM-4RGLR 8.9
GTEX-Z93S-0011-R5b-SM-4RGNI 8.9
GTEX-11H98-0011-R5b-SM-57WCF 8.8
GTEX-145LS-0011-R5a-SM-5SI65 8.7
GTEX-14BIN-0011-R5b-SM-5SI78 8.7
GTEX-11OF3-0011-R5a-SM-57WB4 8.5
GTEX-ZE7O-0011-R5a-SM-57WBO 8.5
GTEX-ZXG5-0011-R5b-SM-57WBN 8.5
GTEX-12WSC-0011-R5b-SM-5CVNS 8.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 8.4
GTEX-X261-0011-R5A-SM-3NMB4 8.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 8.3
GTEX-T5JC-0011-R5A-SM-32PLK 8.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 8.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 7.7
GTEX-144GO-0011-R5a-SM-5PNUR 7.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 7.6
GTEX-139T8-0011-R5b-SM-5J1MO 7.4
GTEX-13X6J-0011-R5b-SM-5PNWT 7.4
GTEX-13JVG-0011-R5a-SM-5MR4O 7.3
GTEX-T2IS-0011-R5A-SM-32QP4 7.3
GTEX-NL4W-0011-R5a-SM-2I3GD 7.2
GTEX-NPJ7-0011-R5a-SM-33HBK 7.1
GTEX-144GL-0011-R5b-SM-5PNUJ 7.0
GTEX-13CZV-0011-R5a-SM-5K7XA 6.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 6.7
GTEX-13FHP-0011-R5b-SM-5LZY2 6.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 6.6
GTEX-12ZZX-0011-R5a-SM-5HL89 6.4
GTEX-NL3H-0011-R5a-SM-2I3GB 6.4
GTEX-12WSB-0011-R5b-SM-5GU67 6.2
GTEX-1445S-0011-R5a-SM-5PNUS 5.9
GTEX-ZVT3-0011-R5a-SM-51MSI 5.6
GTEX-11WQC-0011-R5a-SM-5BC74 5.5
GTEX-12WSA-0011-R5b-SM-5GU5I 5.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 5.5
GTEX-OXRN-0011-R5A-SM-2I5EF 5.5
GTEX-11UD1-0011-R5b-SM-5P9FP 5.0
GTEX-1477Z-0011-R5b-SM-5PNUO 4.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 4.6
GTEX-S7PM-0011-R5A-SM-3NM8G 4.5
GTEX-13112-0011-R5b-SM-5DUV8 4.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 4.3
GTEX-13CF2-0011-R5a-SM-5LZWS 3.9
GTEX-ZV68-0011-R5a-SM-4YCDW 3.8
GTEX-YJ89-0011-R5a-SM-4V6GM 3.5
GTEX-13CIG-0011-R5b-SM-5L3F2 3.4
GTEX-145MG-0011-R5b-SM-5S2VU 3.2
GTEX-12WSH-0011-R5b-SM-5P9F3 3.0
GTEX-139TT-0011-R5b-SM-5K7W8 2.8
GTEX-13NZA-0011-R5b-SM-5KM4K 2.5
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

56.3

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 56.3
FF:10164-103B2 76 years, female 65.2
FF:10379-105H1 89 years, female 47.3

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.