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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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SMIM14
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TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:48.1TPM
GTEx:13.6RPKM
FANTOM5:56.7Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody HPA051299

 

Glandular cells

Low  
 
 
 

PROSTATE - HPA RNA-seq

Average TPM

48.1

overview Male, age 62
Sample 1
TPM: 36.1
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 40.0
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 49.5
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 50.5
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 37.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 66.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 56.1
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 63.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 34.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

13.6

GTEx sample id

RPKM

 

Prostate

Prostate
RPKM: 13.6
Samples: 106

Max RPKM: 33.6
Min RPKM: 5.2
Std RPKM: 4.5
Median RPKM: 13.4
GTEX-NFK9-2226-SM-3MJGP 33.6
GTEX-WFG7-1826-SM-3GIL1 26.7
GTEX-ZUA1-2826-SM-59HLE 24.2
GTEX-WH7G-1726-SM-4LVKY 22.7
GTEX-146FQ-1726-SM-5QGPX 21.9
GTEX-REY6-2126-SM-48FD9 20.8
GTEX-SJXC-2026-SM-4DM6N 20.0
GTEX-WZTO-0926-SM-4PQZ3 19.6
GTEX-Y9LG-1826-SM-4VBQC 18.8
GTEX-111FC-2026-SM-5GZYO 18.7
GTEX-V955-1826-SM-4JBIL 18.6
GTEX-QV31-1026-SM-4R1K3 18.5
GTEX-14ABY-0726-SM-5Q5DF 18.4
GTEX-14E6E-1126-SM-5S2R4 18.4
GTEX-PLZ6-1126-SM-3P5ZR 18.0
GTEX-V1D1-1926-SM-4JBGX 18.0
GTEX-11P82-1126-SM-5BC5K 17.2
GTEX-12C56-1326-SM-5FQSV 17.1
GTEX-13FXS-2826-SM-5LZYC 16.9
GTEX-OIZH-2026-SM-3NB1M 16.9
GTEX-13FTW-1226-SM-5LZZ1 16.7
GTEX-YF7O-1926-SM-4W1YQ 16.7
GTEX-SNMC-0926-SM-4DM5U 16.4
GTEX-U4B1-1426-SM-4DXTX 16.3
GTEX-QEG4-2226-SM-4R1JM 16.2
GTEX-WOFM-0326-SM-4OOSL 16.1
GTEX-117YW-1426-SM-5EGGO 16.0
GTEX-U3ZM-0926-SM-4DXSW 16.0
GTEX-ZTX8-1026-SM-5EGHD 15.9
GTEX-11NSD-0826-SM-5986S 15.8
GTEX-11P7K-0626-SM-5985Z 15.8
GTEX-UTHO-2726-SM-4JBH9 15.7
GTEX-ZZ64-0926-SM-5E44L 15.7
GTEX-117YX-1526-SM-5H12T 15.6
GTEX-ZT9W-1626-SM-4YCDQ 15.6
GTEX-11O72-2726-SM-5HL6K 15.5
GTEX-132QS-1126-SM-5P9GC 15.2
GTEX-WFG8-1826-SM-4LVM4 15.0
GTEX-XMK1-1026-SM-4B65H 14.8
GTEX-ZVP2-0826-SM-59HJ6 14.7
GTEX-12BJ1-1226-SM-5LUAE 14.5
GTEX-SNOS-1026-SM-4DM4Y 14.4
GTEX-111CU-1526-SM-5N9FS 14.3
GTEX-12ZZZ-2026-SM-5LZWJ 14.3
GTEX-QV44-1526-SM-4R1KI 14.1
GTEX-11TT1-2026-SM-5EQM8 14.0
GTEX-Q2AI-1126-SM-48U19 14.0
GTEX-139T6-1526-SM-5P9G6 13.9
GTEX-S4Q7-1026-SM-4AD75 13.8
GTEX-XOTO-2826-SM-4B65I 13.8
GTEX-14BMV-2326-SM-5RQJ4 13.6
GTEX-S95S-1026-SM-4B64M 13.5
GTEX-X5EB-1826-SM-4E3K8 13.5
GTEX-S33H-1826-SM-4AD65 13.3
GTEX-XQ3S-2526-SM-4BOOG 13.3
GTEX-YB5E-1826-SM-5IFI4 13.3
GTEX-13O61-1726-SM-5KM46 13.2
GTEX-ZDYS-1226-SM-5IJF3 13.2
GTEX-QMRM-1426-SM-4R1K8 13.1
GTEX-WFON-1626-SM-4LVMV 13.1
GTEX-1399R-0526-SM-5IJEF 13.0
GTEX-13N2G-1826-SM-5KM1I 13.0
GTEX-132NY-2826-SM-5P9G2 12.9
GTEX-ZLFU-1726-SM-4WWBU 12.7
GTEX-11DYG-2526-SM-5N9BB 12.5
GTEX-13OW8-0426-SM-5J2NR 12.4
GTEX-T8EM-1826-SM-4DM7F 12.4
GTEX-1399T-1226-SM-5P9J5 12.1
GTEX-QLQ7-1326-SM-4R1JY 11.8
GTEX-S3XE-1326-SM-4AD4H 11.8
GTEX-145LT-0626-SM-5O99E 11.6
GTEX-13FHO-2826-SM-5K7ZA 11.2
GTEX-148VJ-1826-SM-5Q5DV 11.2
GTEX-13O21-1126-SM-5N9EV 11.1
GTEX-Y8E4-2126-SM-5RQHO 11.1
GTEX-11ZUS-2126-SM-5N9E6 11.0
GTEX-11OF3-1726-SM-5GU5Q 10.9
GTEX-VJYA-1226-SM-3GIJ6 10.8
GTEX-XGQ4-1826-SM-4AT6F 10.7
GTEX-ZPU1-2026-SM-57WFI 10.5
GTEX-111YS-1726-SM-5GIED 10.2
GTEX-U412-2026-SM-4DXSI 10.1
GTEX-14C5O-2826-SM-5RQI6 10.0
GTEX-12696-2226-SM-5EQ65 9.9
GTEX-XAJ8-0626-SM-47JY4 9.7
GTEX-ZY6K-1526-SM-5GZXE 9.6
GTEX-131XF-1926-SM-5DUW4 9.4
GTEX-13G51-2326-SM-5LZXV 9.3
GTEX-13NYS-1026-SM-5KLZT 9.3
GTEX-NPJ8-2426-SM-3MJHL 9.2
GTEX-11EQ9-1726-SM-5HL6U 9.1
GTEX-RWSA-2026-SM-47JX8 8.9
GTEX-11TUW-2126-SM-5GU7B 8.8
GTEX-ZTTD-2726-SM-57WFA 8.6
GTEX-145LV-1226-SM-5S2QH 8.5
GTEX-RM2N-1126-SM-48FCY 8.5
GTEX-WK11-2626-SM-4OOSK 8.2
GTEX-XPVG-2026-SM-4B65E 8.0
GTEX-OOBJ-2026-SM-3NB1R 7.2
GTEX-13RTJ-2126-SM-5S2PZ 7.0
GTEX-144GM-0826-SM-5O98R 7.0
GTEX-13111-1326-SM-5GCNO 6.9
GTEX-OOBK-2025-SM-3LK5S 6.4
GTEX-11WQK-2726-SM-5EQMU 5.7
GTEX-YJ8A-1126-SM-5IFJU 5.7
GTEX-U8XE-2526-SM-4E3IT 5.2
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

56.7

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 56.7
FF:10022-101D4 73,79,93 years, male 56.7

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