Expression of RBM47 in cancer - Summary - The Human Protein Atlas

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RBM47

TISSUE

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CELL

CANCER

CANCER ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

CANCER ATLAS

Gene description

RNA binding motif protein 47

Protein class

Predicted intracellular proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Liver cancer

STAINING SUMMARY

HPA006347

GENE INFORMATION
Gene name	RBM47 (HGNC Symbol)
Synonyms	FLJ20273, NET18
Description	RNA binding motif protein 47 (HGNC Symbol)
Entrez gene summary
Chromosome	4
Cytoband	p14
Chromosome location (bp)	40423267 - 40630875
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000163694 (version 83.38)
Entrez gene	54502
UniProt	A0AV96 (UniProt - Evidence at protein level)
neXtProt	NX_A0AV96
Antibodypedia	RBM47 antibodies

PROTEIN BROWSER

RBM47-001	RBM47-002	RBM47-005	RBM47-006	RBM47-008	RBM47-009	RBM47-010	RBM47-011	RBM47-012	RBM47-013	RBM47-014	RBM47-015

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
RBM47-001 ENSP00000371212 ENST00000381793	A0AV96 [Direct mapping] RNA-binding protein 47 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0000166 [nucleotide binding] GO:0002244 [hematopoietic progenitor cell differentiation] GO:0003676 [nucleic acid binding] GO:0003723 [RNA binding] GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0016554 [cytidine to uridine editing] GO:0044822 [poly(A) RNA binding] Show all	593 aa 64.1 kDa	No	0
RBM47-002 ENSP00000371214 ENST00000381795	A0AV96 [Direct mapping] RNA-binding protein 47 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0000166 [nucleotide binding] GO:0003676 [nucleic acid binding] GO:0005634 [nucleus] GO:0044822 [poly(A) RNA binding] Show all	524 aa 56.9 kDa	No	0
RBM47-005 ENSP00000423243 ENST00000514014	B7Z8Z7 [Direct mapping] RNA-binding protein 47; cDNA FLJ51456, moderately similar to APOBEC1 complementation factor Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0000166 [nucleotide binding] GO:0003676 [nucleic acid binding] Show all	555 aa 60.6 kDa	No	0
RBM47-006 ENSP00000295971 ENST00000295971	A0AV96 [Direct mapping] RNA-binding protein 47 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0000166 [nucleotide binding] GO:0003676 [nucleic acid binding] GO:0005634 [nucleus] GO:0044822 [poly(A) RNA binding] Show all	593 aa 64.1 kDa	No	0
RBM47-008 ENSP00000424019 ENST00000511598	D6RBP6 [Direct mapping] RNA-binding protein 47 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0000166 [nucleotide binding] GO:0003676 [nucleic acid binding] Show all	114 aa 12.2 kDa	No	0
RBM47-009 ENSP00000423527 ENST00000505414	D6R9M7 [Direct mapping] RNA-binding protein 47 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0000166 [nucleotide binding] GO:0003676 [nucleic acid binding] Show all	159 aa 17.4 kDa	No	0
RBM47-010 ENSP00000425507 ENST00000505220	D6RCT1 [Direct mapping] RNA-binding protein 47 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		59 aa 5.9 kDa	No	0
RBM47-011 ENSP00000422564 ENST00000515053	D6RBS9 [Direct mapping] RNA-binding protein 47 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0000166 [nucleotide binding] GO:0003676 [nucleic acid binding] Show all	217 aa 24 kDa	No	0
RBM47-012 ENSP00000425111 ENST00000511902	D6RCT1 [Direct mapping] RNA-binding protein 47 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		59 aa 5.9 kDa	No	0
RBM47-013 ENSP00000426542 ENST00000514782	D6RFL5 [Direct mapping] RNA-binding protein 47 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0000166 [nucleotide binding] GO:0003676 [nucleic acid binding] Show all	137 aa 15.1 kDa	No	0
RBM47-014 ENSP00000423398 ENST00000507180	D6RA49 [Direct mapping] RNA-binding protein 47 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0000166 [nucleotide binding] GO:0003676 [nucleic acid binding] Show all	124 aa 13.5 kDa	No	0
RBM47-015 ENSP00000421589 ENST00000513473	D6REZ6 [Direct mapping] RNA-binding protein 47 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0000166 [nucleotide binding] GO:0003676 [nucleic acid binding] Show all	193 aa 21.2 kDa	No	0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.