Expression of PRRT3 in cancer - Summary

CANCER ATLAS

Gene description

Proline-rich transmembrane protein 3

Protein class

Predicted membrane proteins, Predicted secreted proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

STAINING SUMMARY

HPA035127	HPA035128

GENE INFORMATION
Gene name	PRRT3 (HGNC Symbol)
Synonyms	FLJ33674
Description	Proline-rich transmembrane protein 3 (HGNC Symbol)
Entrez gene summary
Chromosome	3
Cytoband	p25.3
Chromosome location (bp)	9945542 - 9952394
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000163704 (version 83.38)
Entrez gene	285368
UniProt	Q5FWE3 (UniProt - Evidence at protein level)
neXtProt	NX_Q5FWE3
Antibodypedia	PRRT3 antibodies

PROTEIN BROWSER

PRRT3-001	PRRT3-004

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
PRRT3-001 ENSP00000392511 ENST00000412055	Q5FWE3 [Direct mapping] Proline-rich transmembrane protein 3 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 7TM proteins predicted by MDM Protein evidence (Kim et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	981 aa 102.2 kDa	Yes	7
PRRT3-004 ENSP00000404512 ENST00000411976	Q5FWE3 [Direct mapping] Proline-rich transmembrane protein 3 Show all	MEMSAT-SVM predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all	GO:0016021 [integral component of membrane] Show all	421 aa 44.1 kDa	Yes	0