Tissue expression of HPS3 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	6.3	TPM
GTEx:	2.8	RPKM
FANTOM5:	20.0	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Medium

Antibody staining	Antibody HPA046281
Squamous epithelial cells	Medium

ESOPHAGUS - HPA RNA-seq

Average TPM	6.3

Female, age 70

Sample 1
TPM: 5.5

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 8.5

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 4.8

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	2.8

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 2.8

Samples: 286

Max RPKM: 6.7
Min RPKM: 0.8
Std RPKM: 0.9
Median RPKM: 2.7

GTEX-ZT9X-0526-SM-5GCOP

6.7

GTEX-146FQ-1026-SM-5LU8I

5.4

GTEX-P4QS-0626-SM-3NMD1

5.4

GTEX-133LE-0626-SM-5IFFJ

5.3

GTEX-ZYWO-1026-SM-5E45U

5.3

GTEX-TMMY-1126-SM-4DXSX

5.0

GTEX-ZAB5-0926-SM-5CVMV

4.9

GTEX-RUSQ-0826-SM-47JWW

4.8

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	20.0

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 20.0

FF:10015-101C6

68,74,75 years, mixed

20.0