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Term
Gene name

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External id

In atlas

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Validation

Method

Validation

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Searches

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Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TGM4
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    TISSUE

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TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:688.5TPM
GTEx:370.6RPKM
FANTOM5:41.9Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA032072

 

Antibody CAB033571

 

Glandular cells

High   Medium  
   
   
   

PROSTATE - HPA RNA-seq

Average TPM

688.5

overview Male, age 62
Sample 1
TPM: 0.2
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 132.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 465.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 3495.3
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 1.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 514.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 0.5
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 1568.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 0.0
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

370.6

GTEx sample id

RPKM

2.810.895.80.0221.701,0002,0003,0004,0005,0006,0007,0008,0009,000
 
2.810.895.80.0221.701,0002,0003,0004,0005,0006,0007,0008,0009,000

Prostate

Prostate
RPKM: 370.6
Samples: 106

Max RPKM: 9200.9
Min RPKM: 0
Std RPKM: 1151.8
Median RPKM: 10.8
GTEX-S4Q7-1026-SM-4AD75 9200.9
GTEX-V1D1-1926-SM-4JBGX 4113.6
GTEX-U3ZM-0926-SM-4DXSW 3565.7
GTEX-QV31-1026-SM-4R1K3 3140.4
GTEX-Q2AI-1126-SM-48U19 2921.2
GTEX-YB5E-1826-SM-5IFI4 2755.4
GTEX-ZLFU-1726-SM-4WWBU 2402.7
GTEX-ZUA1-2826-SM-59HLE 1829.7
GTEX-Y8E4-2126-SM-5RQHO 1443.4
GTEX-1399R-0526-SM-5IJEF 972.9
GTEX-WFG7-1826-SM-3GIL1 872.4
GTEX-145LT-0626-SM-5O99E 716.4
GTEX-ZTTD-2726-SM-57WFA 619.7
GTEX-139T6-1526-SM-5P9G6 422.5
GTEX-11DYG-2526-SM-5N9BB 359.9
GTEX-ZDYS-1226-SM-5IJF3 354.4
GTEX-12BJ1-1226-SM-5LUAE 323.5
GTEX-Y9LG-1826-SM-4VBQC 322.4
GTEX-14ABY-0726-SM-5Q5DF 311.1
GTEX-13NYS-1026-SM-5KLZT 271.5
GTEX-XQ3S-2526-SM-4BOOG 247.6
GTEX-146FQ-1726-SM-5QGPX 221.7
GTEX-11ZUS-2126-SM-5N9E6 214.5
GTEX-U4B1-1426-SM-4DXTX 178.9
GTEX-11OF3-1726-SM-5GU5Q 149.4
GTEX-14E6E-1126-SM-5S2R4 147.6
GTEX-OOBJ-2026-SM-3NB1R 96.9
GTEX-11P7K-0626-SM-5985Z 92.4
GTEX-OOBK-2025-SM-3LK5S 82.5
GTEX-13FHO-2826-SM-5K7ZA 72.6
GTEX-UTHO-2726-SM-4JBH9 66.2
GTEX-WFON-1626-SM-4LVMV 66.1
GTEX-1399T-1226-SM-5P9J5 56.3
GTEX-ZT9W-1626-SM-4YCDQ 49.7
GTEX-13FTW-1226-SM-5LZZ1 46.5
GTEX-RWSA-2026-SM-47JX8 45.1
GTEX-NFK9-2226-SM-3MJGP 36.8
GTEX-ZY6K-1526-SM-5GZXE 31.8
GTEX-YF7O-1926-SM-4W1YQ 30.6
GTEX-11WQK-2726-SM-5EQMU 28.5
GTEX-12696-2226-SM-5EQ65 27.2
GTEX-11TUW-2126-SM-5GU7B 24.5
GTEX-13FXS-2826-SM-5LZYC 21.1
GTEX-ZPU1-2026-SM-57WFI 20.4
GTEX-XAJ8-0626-SM-47JY4 19.8
GTEX-PLZ6-1126-SM-3P5ZR 18.2
GTEX-132QS-1126-SM-5P9GC 15.9
GTEX-11NSD-0826-SM-5986S 14.0
GTEX-WZTO-0926-SM-4PQZ3 13.4
GTEX-V955-1826-SM-4JBIL 13.1
GTEX-ZVP2-0826-SM-59HJ6 11.7
GTEX-13111-1326-SM-5GCNO 11.4
GTEX-SNOS-1026-SM-4DM4Y 11.0
GTEX-13G51-2326-SM-5LZXV 10.7
GTEX-111YS-1726-SM-5GIED 9.5
GTEX-13OW8-0426-SM-5J2NR 8.8
GTEX-VJYA-1226-SM-3GIJ6 8.7
GTEX-11EQ9-1726-SM-5HL6U 7.6
GTEX-XMK1-1026-SM-4B65H 7.2
GTEX-S95S-1026-SM-4B64M 7.1
GTEX-ZTX8-1026-SM-5EGHD 6.8
GTEX-11TT1-2026-SM-5EQM8 6.6
GTEX-S3XE-1326-SM-4AD4H 6.6
GTEX-U412-2026-SM-4DXSI 6.4
GTEX-111FC-2026-SM-5GZYO 6.3
GTEX-RM2N-1126-SM-48FCY 6.1
GTEX-13N2G-1826-SM-5KM1I 5.5
GTEX-REY6-2126-SM-48FD9 5.1
GTEX-WFG8-1826-SM-4LVM4 5.1
GTEX-XOTO-2826-SM-4B65I 5.1
GTEX-12C56-1326-SM-5FQSV 4.5
GTEX-12ZZZ-2026-SM-5LZWJ 4.3
GTEX-132NY-2826-SM-5P9G2 4.3
GTEX-SNMC-0926-SM-4DM5U 4.3
GTEX-ZZ64-0926-SM-5E44L 4.2
GTEX-131XF-1926-SM-5DUW4 3.9
GTEX-QMRM-1426-SM-4R1K8 3.6
GTEX-SJXC-2026-SM-4DM6N 3.6
GTEX-14C5O-2826-SM-5RQI6 3.0
GTEX-117YW-1426-SM-5EGGO 2.8
GTEX-148VJ-1826-SM-5Q5DV 2.5
GTEX-WH7G-1726-SM-4LVKY 2.5
GTEX-S33H-1826-SM-4AD65 2.3
GTEX-111CU-1526-SM-5N9FS 2.2
GTEX-X5EB-1826-SM-4E3K8 2.2
GTEX-145LV-1226-SM-5S2QH 1.8
GTEX-QEG4-2226-SM-4R1JM 1.4
GTEX-11O72-2726-SM-5HL6K 1.2
GTEX-WK11-2626-SM-4OOSK 1.2
GTEX-U8XE-2526-SM-4E3IT 1.1
GTEX-11P82-1126-SM-5BC5K 1.0
GTEX-NPJ8-2426-SM-3MJHL 0.9
GTEX-XPVG-2026-SM-4B65E 0.9
GTEX-13O61-1726-SM-5KM46 0.8
GTEX-QV44-1526-SM-4R1KI 0.8
GTEX-13O21-1126-SM-5N9EV 0.6
GTEX-13RTJ-2126-SM-5S2PZ 0.6
GTEX-YJ8A-1126-SM-5IFJU 0.6
GTEX-T8EM-1826-SM-4DM7F 0.5
GTEX-14BMV-2326-SM-5RQJ4 0.4
GTEX-OIZH-2026-SM-3NB1M 0.4
GTEX-XGQ4-1826-SM-4AT6F 0.3
GTEX-QLQ7-1326-SM-4R1JY 0.2
GTEX-117YX-1526-SM-5H12T 0.1
GTEX-144GM-0826-SM-5O98R 0.0
GTEX-WOFM-0326-SM-4OOSL 0.0
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

41.9

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 41.9
FF:10022-101D4 73,79,93 years, male 41.9

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