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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 47.6
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 19.3
Min RPKM: 3.8
Std RPKM: 3.1
Median RPKM: 11.4
GTEX-QMR6-1426-SM-32PLA
19.3
GTEX-TSE9-3026-SM-3DB76
17.8
GTEX-11OF3-2926-SM-5HL78
17.4
GTEX-13OW7-3026-SM-5L3GY
17.2
GTEX-11NUK-2926-SM-5A5MD
16.6
GTEX-PVOW-2526-SM-2XCF7
16.2
GTEX-11O72-2926-SM-5BC4V
15.8
GTEX-XLM4-3026-SM-4AT6L
15.5
GTEX-131XW-3126-SM-5LZUC
15.2
GTEX-13X6K-2926-SM-5Q5D5
15.1
GTEX-ZAK1-3026-SM-5S2MJ
15.1
GTEX-11GSP-3226-SM-5986O
15.0
GTEX-T2IS-3026-SM-32QPM
15.0
GTEX-WZTO-2926-SM-3NM9I
15.0
GTEX-12ZZZ-3026-SM-5BC67
14.9
GTEX-1399T-3026-SM-5KLZC
14.2
GTEX-WHSE-3026-SM-3P5ZH
14.2
GTEX-12ZZX-2926-SM-5GCOQ
14.1
GTEX-13X6J-3026-SM-5Q5CU
14.1
GTEX-12WSD-3126-SM-5HL7P
13.9
GTEX-13OW6-3026-SM-5J2MI
13.8
GTEX-ZE7O-3126-SM-5HL5X
13.7
GTEX-13JVG-3126-SM-5L3FH
13.6
GTEX-11DXY-3226-SM-5GIDE
13.5
GTEX-14ASI-3026-SM-5S2PN
13.4
GTEX-144GL-3026-SM-5Q5CW
13.3
GTEX-11GSO-2926-SM-5HL73
13.2
GTEX-13FXS-3126-SM-5J2NN
13.2
GTEX-Y8DK-0826-SM-4TT3T
13.2
GTEX-13OVJ-2826-SM-5L3GW
13.1
GTEX-11DXW-1126-SM-5H12Q
13.0
GTEX-11TTK-2926-SM-5PNYP
13.0
GTEX-RU72-3026-SM-5SI7Y
13.0
GTEX-14BMV-3026-SM-5S2PQ
12.9
GTEX-11PRG-2926-SM-5987A
12.7
GTEX-14A5I-2926-SM-5Q5CQ
12.7
GTEX-UTHO-3026-SM-3GAFB
12.7
GTEX-131YS-3126-SM-5KLYT
12.6
GTEX-145MH-3026-SM-5Q5DZ
12.6
GTEX-145MF-2726-SM-5O995
12.4
GTEX-13S7M-3126-SM-5RQJQ
12.3
GTEX-RNOR-2326-SM-2TF4I
12.3
GTEX-OXRN-2426-SM-2I5EQ
12.2
GTEX-ZUA1-3026-SM-59HJC
12.2
GTEX-13PL6-3126-SM-5LUAR
12.1
GTEX-145MG-3026-SM-5RQJA
12.1
GTEX-YFC4-3126-SM-5PNV6
12.1
GTEX-11EMC-3226-SM-5EGKW
12.0
GTEX-13O3O-3126-SM-5KM3H
12.0
GTEX-R55F-1326-SM-5S2V4
12.0
GTEX-111FC-3126-SM-5GZZ2
11.9
GTEX-13OVH-3026-SM-5MR4N
11.7
GTEX-XOTO-3026-SM-4B65M
11.7
GTEX-1128S-2726-SM-5H12C
11.6
GTEX-X4XX-3026-SM-3NMB2
11.6
GTEX-11EI6-3026-SM-5GZZO
11.5
GTEX-ZVT3-3026-SM-5E43N
11.5
GTEX-Y111-2726-SM-4TT3N
11.4
GTEX-12ZZW-2926-SM-5LZUP
11.3
GTEX-145LS-3126-SM-5Q5BY
11.3
GTEX-13O3Q-2926-SM-5KM45
11.1
GTEX-13OW8-2826-SM-5L3GC
11.1
GTEX-WVLH-3026-SM-3MJG9
11.1
GTEX-11OC5-0726-SM-5P9JK
11.0
GTEX-13VXU-2926-SM-5LU5C
11.0
GTEX-QVUS-2826-SM-3GADB
10.9
GTEX-11WQK-3026-SM-5EQL6
10.8
GTEX-WWYW-3126-SM-3NB39
10.7
GTEX-13NYC-2826-SM-5K7WR
10.6
GTEX-T5JC-2426-SM-3NMDB
10.6
GTEX-QVJO-1426-SM-2S1QY
10.5
GTEX-12126-1026-SM-5P9JJ
10.0
GTEX-1445S-3026-SM-5O9BR
10.0
GTEX-ZYFD-3026-SM-5E44C
9.9
GTEX-YJ89-3026-SM-5IFJI
9.8
GTEX-11ZUS-2926-SM-5FQSL
9.7
GTEX-PWO3-0926-SM-2I5EY
9.7
GTEX-13PVQ-3026-SM-5SI93
9.6
GTEX-13QIC-2926-SM-5J2NF
9.6
GTEX-12WSH-3026-SM-5CVNI
9.5
GTEX-12ZZY-3026-SM-5GCOU
9.4
GTEX-13FHP-3026-SM-5IJBS
9.4
GTEX-QDT8-2926-SM-32PKC
9.4
GTEX-WL46-2926-SM-3LK82
9.4
GTEX-12WSC-3026-SM-5GCNF
9.3
GTEX-13JUV-2926-SM-5LZX7
9.3
GTEX-T6MN-2626-SM-32PMQ
9.3
GTEX-117XS-3026-SM-5N9CA
8.9
GTEX-11ONC-2926-SM-5P9JM
8.9
GTEX-1192X-3126-SM-5N9BY
8.6
GTEX-13NYB-3026-SM-5IJD7
8.6
GTEX-13FHO-3026-SM-5J1O9
8.3
GTEX-1313W-3126-SM-5LZUI
7.9
GTEX-Q2AG-2926-SM-2HMJ3
7.9
GTEX-132Q8-3026-SM-5PNVG
7.8
GTEX-13SLX-3126-SM-5S2Q5
7.8
GTEX-13FLW-1426-SM-5K7YE
7.7
GTEX-147GR-3026-SM-5S2ML
7.7
GTEX-13NYS-3126-SM-5KLYV
7.3
GTEX-X585-3026-SM-46MWF
7.2
GTEX-Z93S-2926-SM-57WB9
7.2
GTEX-13IVO-2926-SM-5L3CZ
7.1
GTEX-12WSA-2926-SM-5EQ4D
6.7
GTEX-139T8-1026-SM-5J2MC
6.7
GTEX-11GS4-3126-SM-5A5LH
6.1
GTEX-11NV4-2126-SM-5N9DS
5.9
GTEX-ZZPT-3026-SM-5GZXH
5.6
GTEX-N7MT-1126-SM-5SI7V
5.5
GTEX-13G51-3026-SM-5IJB8
5.2
GTEX-ZAJG-3126-SM-5HL9J
4.9
GTEX-NPJ7-2726-SM-2I3FT
4.8
GTEX-144FL-3026-SM-5O99C
4.6
GTEX-1117F-3226-SM-5N9CT
4.4
GTEX-NPJ8-1526-SM-2D7VU
3.8
Show all
Brain - Frontal Cortex (BA9)
Brain - Frontal Cortex (BA9) RPKM: 13.6
Samples: 108
Max RPKM: 23.9
Min RPKM: 4.1
Std RPKM: 4.1
Median RPKM: 13.7
GTEX-P44H-0011-R10A-SM-2XCEK
23.9
GTEX-QDT8-0011-R10A-SM-32PKG
23.6
GTEX-13OW8-0011-R10a-SM-5L3H6
22.7
GTEX-QMR6-0011-R10A-SM-32PKO
22.2
GTEX-13OVJ-0011-R10b-SM-5L3HT
21.6
GTEX-S7SE-0011-R10A-SM-2XCDF
20.6
GTEX-XLM4-0011-R10A-SM-4AT5P
20.2
GTEX-T6MN-0011-R10A-SM-32QP7
20.1
GTEX-WVLH-0011-R10A-SM-3MJFM
20.1
GTEX-QVUS-0011-R10A-SM-3GIK3
19.6
GTEX-WL46-0011-R10A-SM-3MJFQ
19.5
GTEX-13FLV-0011-R10b-SM-5LZZ2
18.8
GTEX-TSE9-0011-R10A-SM-3DB7O
18.6
GTEX-12126-0011-R10b-SM-5BC6T
18.0
GTEX-1445S-0011-R10a-SM-5PNWB
18.0
GTEX-145LU-0011-R10a-SM-5PNWJ
17.5
GTEX-13SLW-0011-R10a-SM-5S2UI
17.3
GTEX-QVJO-0011-R10A-SM-2S1QJ
17.2
GTEX-YFC4-0011-R10a-SM-4SOK5
17.1
GTEX-13JUV-0011-R10b-SM-5LZXR
16.9
GTEX-14753-0011-R10b-SM-5S2WE
16.8
GTEX-13OVL-0011-R10a-SM-5L3GS
16.7
GTEX-131YS-0011-R10b-SM-5EQ5N
16.6
GTEX-12WSD-0011-R10b-SM-5GU79
16.5
GTEX-11H98-0011-R10b-SM-5NQ98
16.4
GTEX-139TS-0011-R10a-SM-5K7TU
16.3
GTEX-13FXS-0011-R10a-SM-5J2MA
16.2
GTEX-Q2AG-0011-R10A-SM-2HMLA
16.2
GTEX-12WSE-0011-R10b-SM-5P9JV
16.1
GTEX-145MH-0011-R10b-SM-5PNUK
16.0
GTEX-ZAB4-0011-R10a-SM-4SOKH
15.8
GTEX-11GSP-0011-R10a-SM-5NQ7J
15.7
GTEX-ZUA1-0011-R10a-SM-51MT6
15.7
GTEX-11WQC-0011-R10a-SM-57WCT
15.4
GTEX-12ZZX-0011-R10b-SM-5DUWK
15.4
GTEX-Y8DK-0011-R10A-SM-4SOK1
15.2
GTEX-13G51-0011-R10b-SM-5LZYF
15.1
GTEX-14ASI-0011-R10b-SM-5S2VZ
15.1
GTEX-X4XX-0011-R10B-SM-46MWO
15.0
GTEX-1477Z-0011-R10b-SM-5S2RF
14.9
GTEX-12WSM-0011-R10a-SM-5DUWV
14.8
GTEX-13FTZ-0011-R10b-SM-5KLZS
14.8
GTEX-145MG-0011-R10a-SM-5PNWG
14.7
GTEX-14BIL-0011-R10a-SM-5SI75
14.7
GTEX-T5JC-0011-R10A-SM-32PM2
14.6
GTEX-13CZV-0011-R10b-SM-5LZYD
14.4
GTEX-13S7M-0011-R10b-SM-5PNZB
14.4
GTEX-147F4-0011-R10b-SM-5S2WC
14.4
GTEX-13X6K-0011-R10a-SM-5P9JR
14.3
GTEX-13FHO-0011-R10b-SM-5J2MM
14.0
GTEX-13O3Q-0011-R10b-SM-5KM39
14.0
GTEX-12ZZW-0011-R10b-SM-5HL9X
13.9
GTEX-YJ89-0011-R10a-SM-4SOK9
13.8
GTEX-WZTO-0011-R10B-SM-4E3KB
13.7
GTEX-145LS-0011-R10a-SM-5PNUQ
13.6
GTEX-ZVZQ-0011-R10b-SM-51MRT
13.6
GTEX-12ZZY-0011-R10b-SM-5HL7W
13.5
GTEX-12WSC-0011-R10a-SM-5GU57
13.4
GTEX-WWYW-0011-R10A-SM-3NB35
13.4
GTEX-13X6J-0011-R10b-SM-5PNWA
13.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC
13.1
GTEX-13OW6-0011-R10a-SM-5L3HE
13.1
GTEX-OXRN-0011-R10A-SM-2I5GC
13.0
GTEX-X585-0011-R10A-SM-46MUY
12.6
GTEX-131XH-0011-R10a-SM-5EGLJ
12.4
GTEX-13N1W-0011-R10b-SM-5MR4H
12.2
GTEX-12WSF-0011-R10a-SM-5LZVH
12.1
GTEX-13NYB-0011-R10a-SM-5KM43
12.1
GTEX-N7MS-0011-R10A-SM-2HMJK
12.1
GTEX-13OW7-0011-R10a-SM-5L3H3
12.0
GTEX-14BIN-0011-R10a-SM-5S2UA
12.0
GTEX-132Q8-0011-R10b-SM-5DUWZ
11.8
GTEX-13QIC-0011-R10a-SM-5O9C7
11.7
GTEX-12WSH-0011-R10a-SM-5LZUS
11.6
GTEX-147GR-0011-R10b-SM-5S2UM
11.6
GTEX-13RTJ-0011-R10b-SM-5O9CW
11.5
GTEX-N7MT-0011-R10A-SM-2I3E1
11.4
GTEX-ZV68-0011-R10a-SM-51MT7
11.4
GTEX-ZVT3-0011-R10b-SM-57WB6
11.2
GTEX-ZDXO-0011-R10a-SM-4WWD8
11.1
GTEX-13X6I-0011-R10a-SM-5PNWI
10.9
GTEX-NPJ7-0011-R10A-SM-2I3E5
10.9
GTEX-11WQK-0011-R10a-SM-5BC6R
10.8
GTEX-13O3O-0011-R10a-SM-5LUA9
10.7
GTEX-RVPU-0011-R10A-SM-2XCAH
10.5
GTEX-ZF28-0011-R10a-SM-4WWEH
10.4
GTEX-Z93S-0011-R10a-SM-4RGNM
10.2
GTEX-1313W-0011-R10b-SM-5DUXA
10.1
GTEX-13FLW-0011-R10b-SM-5LZZF
9.9
GTEX-131XW-0011-R10a-SM-5DUVA
9.7
GTEX-OXRO-0011-R10A-SM-2I5EH
9.6
GTEX-X4EP-0011-R10B-SM-4QASJ
9.3
GTEX-NL4W-0011-R10A-SM-2I3DY
9.2
GTEX-11ZUS-0011-R10b-SM-5BC79
9.1
GTEX-13SLX-0011-R10a-SM-5P9HV
8.5
GTEX-13JVG-0011-R10b-SM-5KM2P
8.4
GTEX-12WSA-0011-R10b-SM-5P9ET
8.1
GTEX-NL3H-0011-R10A-SM-2I3E9
7.9
GTEX-ZXG5-0011-R10a-SM-57WDD
7.9
GTEX-13QJC-0011-R10a-SM-5SI63
7.8
GTEX-13N2G-0011-R10a-SM-5MR34
7.5
GTEX-X261-0011-R10B-SM-4E3JT
7.5
GTEX-13NZA-0011-R10b-SM-5KM54
6.7
GTEX-NPJ8-0011-R10A-SM-2YUMO
6.7
GTEX-13NYS-0011-R10a-SM-5MR4S
5.8
GTEX-XMD1-0011-R10A-SM-4AT4A
4.8
GTEX-ZE7O-0011-R10a-SM-57WAZ
4.4
GTEX-13IVO-0011-R10a-SM-5LZY3
4.1
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.