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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:19506.1TPM
GTEx:6107.1RPKM
FANTOM5:12262.6Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA015775

 

Antibody CAB069919

 

Glandular cells

Medium   Medium  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

19506.1

overview Male, age 65
Sample 1
TPM: 18351.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 17482.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 20419.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 21771.8

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

6107.1

GTEx sample id

RPKM

2770.34951.99289.52.318011.702,0004,0006,0008,00010,00012,00014,00016,00018,00020,00022,000
 
2770.34951.99289.52.318011.702,0004,0006,0008,00010,00012,00014,00016,00018,00020,00022,000

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 6107.1
Samples: 88

Max RPKM: 22304.9
Min RPKM: 2.3
Std RPKM: 4743
Median RPKM: 4951.9
GTEX-13RTK-0826-SM-5Q5C6 22304.9
GTEX-139T6-1026-SM-5IJGC 19898.5
GTEX-VJYA-0926-SM-4KL1N 18011.7
GTEX-ZA64-1226-SM-5HL7B 14308.0
GTEX-13PL7-2626-SM-5IFH4 13674.1
GTEX-YB5E-1526-SM-5IFIE 13549.9
GTEX-ZTSS-0926-SM-59865 13434.2
GTEX-XBED-1426-SM-4AT4G 13408.4
GTEX-148VJ-2226-SM-5NQ9M 13394.9
GTEX-ZQG8-2526-SM-57WEQ 13048.1
GTEX-ZYFG-2026-SM-5E43Y 13033.4
GTEX-XUZC-1426-SM-4BRV3 12537.1
GTEX-11P7K-1626-SM-5GU63 11239.4
GTEX-Y5LM-1626-SM-4VDTB 11160.3
GTEX-145LT-1026-SM-5LU9O 11061.7
GTEX-13FTW-2026-SM-5IJE2 11004.7
GTEX-XGQ4-1326-SM-4GIDU 10756.7
GTEX-13O21-1026-SM-5IJDU 10612.7
GTEX-133LE-1426-SM-5IFH1 10236.6
GTEX-ZXES-1526-SM-5NQ95 9869.9
GTEX-YF7O-1826-SM-5IFIU 9602.5
GTEX-1122O-1326-SM-5H11F 9482.2
GTEX-13113-1226-SM-5EGHT 9225.3
GTEX-X5EB-1626-SM-4E3IV 8410.9
GTEX-ZTX8-0526-SM-59HLD 8219.4
GTEX-ZP4G-1626-SM-57WGD 7966.5
GTEX-11EQ9-1326-SM-5985X 7730.3
GTEX-13D11-0726-SM-5LZZB 7228.6
GTEX-ZLFU-1526-SM-4WWBT 6816.5
GTEX-WFG8-1626-SM-4LVMB 6639.2
GTEX-11DXX-1626-SM-5H11H 6611.1
GTEX-ZLV1-1126-SM-4WWBW 6479.8
GTEX-11I78-1126-SM-5A5K5 6341.5
GTEX-13CF3-1226-SM-5LZXN 6238.1
GTEX-YEC4-1726-SM-4W21E 6088.9
GTEX-131XF-1326-SM-5GCMQ 5704.1
GTEX-1399U-2126-SM-5IFEZ 5597.7
GTEX-ZVZP-1826-SM-5GZXB 5529.2
GTEX-ZYWO-1526-SM-5SIAL 5166.6
GTEX-WFG7-1726-SM-4LVME 5134.8
GTEX-Y3IK-1726-SM-4YCCR 5114.6
GTEX-14DAR-1426-SM-5RQIR 5099.7
GTEX-ZVT2-2126-SM-5NQ93 5096.0
GTEX-145ME-0926-SM-5O9AR 5085.6
GTEX-11DXZ-1326-SM-5H11X 4818.1
GTEX-14E6E-1626-SM-5RQI7 4578.2
GTEX-X15G-1426-SM-4PQZK 4536.7
GTEX-WH7G-1626-SM-4LVMY 4483.9
GTEX-ZPCL-1726-SM-57WEO 4419.6
GTEX-WRHK-1026-SM-4MVOD 4411.9
GTEX-ZEX8-1826-SM-57WBH 4380.2
GTEX-Y114-1426-SM-4TT6W 4188.9
GTEX-XXEK-1026-SM-4BRUW 4113.3
GTEX-11P82-0826-SM-5P9GU 3829.9
GTEX-131XG-1726-SM-5LZUR 3820.0
GTEX-139YR-2226-SM-5IFFW 3755.9
GTEX-XAJ8-0526-SM-47JYK 3731.0
GTEX-WQUQ-2426-SM-4MVNW 3659.6
GTEX-ZPIC-2326-SM-57WDW 3613.6
GTEX-11NSD-1726-SM-5N9C3 3442.7
GTEX-ZZ64-0526-SM-5GZXM 3387.4
GTEX-11VI4-1626-SM-5EQKO 3341.1
GTEX-11XUK-1426-SM-5EQMG 2969.0
GTEX-13QBU-1926-SM-5IJEW 2953.6
GTEX-111YS-1426-SM-5GID8 2807.4
GTEX-12BJ1-1926-SM-5HL9Z 2787.6
GTEX-ZVP2-1726-SM-5GU5P 2718.4
GTEX-13FH7-1226-SM-5IJFK 2639.7
GTEX-Z9EW-0926-SM-5CVMM 2638.0
GTEX-13O61-1326-SM-5KM31 2592.6
GTEX-Y9LG-1626-SM-5IFHM 2117.7
GTEX-ZTPG-2626-SM-57WFX 2034.9
GTEX-12WSK-1526-SM-5CVNO 1963.9
GTEX-1399R-2026-SM-5K7WN 1884.7
GTEX-1399S-2026-SM-5KM4B 1492.2
GTEX-ZC5H-2326-SM-4WAYT 1418.9
GTEX-VUSG-1726-SM-4KKZL 1279.2
GTEX-13111-1426-SM-5DUW3 1125.0
GTEX-WEY5-1526-SM-4LMJF 968.6
GTEX-WFJO-0926-SM-4LVM2 816.9
GTEX-13OVI-1926-SM-5IJCG 232.3
GTEX-1192X-2526-SM-59868 177.9
GTEX-UPK5-2026-SM-4JBIM 53.9
GTEX-XMK1-1826-SM-4B66F 49.2
GTEX-ZF2S-1726-SM-57WFT 19.7
GTEX-111CU-1326-SM-5NQ8L 11.5
GTEX-ZQUD-0926-SM-57WE3 4.2
GTEX-117YX-0326-SM-5GICL 2.3
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

12262.6

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 12262.6
FF:10024-101D6 15,40,85 years, mixed 12262.6

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