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DEPDC4

GENERAL INFORMATION

Gene name

 DEPDC4

Gene description

 DEP domain containing 4

Protein class

 Predicted intracellular proteins

Predicted localization

 Intracellular

Number of transcripts

 5
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category
HPA:Tissue enhanced (testis)
GTEx:Tissue enhanced (testis)

Protein evidence

 Evidence at protein level

Protein expression

 Estimation of protein expression could not be performed. View primary data.

DATA RELIABILITY

Data reliability
description

 RNA-based expert annotation gave inconclusive results. Pending external verification.

Reliability score

 Uncertain based on 1 antibody.
HPA039323
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RNA AND PROTEIN EXPRESSION SUMMARY
RNA expression (TPM) Protein expression (score)
Brain
N/A
Hippocampus
N/A
N/A
Caudate
N/A
N/A
Cerebellum
N/A
N/A
Endocrine tissues
N/A
Bone marrow & immune system
N/A
Appendix
N/A
Tonsil
N/A
Spleen
N/A
Muscle tissues
N/A
Lung
N/A
Nasopharynx
N/A
N/A
Bronchus
N/A
N/A
Lung
N/A
Liver & gallbladder
N/A
Liver
N/A
Pancreas
N/A
Pancreas
N/A
Gastrointestinal tract
N/A
Oral mucosa
N/A
N/A
Esophagus
N/A
Stomach
N/A
Duodenum
N/A
Colon
N/A
Rectum
N/A
Kidney & urinary bladder
N/A
Kidney
N/A
Male tissues
N/A
Testis
N/A
Prostate
N/A
Female tissues
N/A
Breast
N/A
Vagina
N/A
N/A
Ovary
N/A
Placenta
N/A
Adipose & soft tissue
N/A
Soft tissue
N/A
N/A
Skin
N/A
Skin
N/A
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW
RNA-based expert annotation could not be performed, due to inconclusive results. View immunohistochemistry primary data.

RNA EXPRESSION OVERVIEW
HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (testis)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (testis)

GENE INFORMATION

Gene name

 DEPDC4 (HGNC Symbol)

Synonyms

 DEP.4, FLJ33505

Description

 DEP domain containing 4 (HGNC Symbol)

Entrez gene summary

Chromosome

 12

Cytoband

 q23.1

Chromosome location (bp)

 100203669 - 100267079

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000166153 (version 83.38)

Entrez gene

 120863

UniProt

 Q8N2C3 (UniProt - Evidence at transcript level)

neXtProt

 NX_Q8N2C3

Antibodypedia

 DEPDC4 antibodies

PROTEIN BROWSER
DEPDC4-001
DEPDC4-002
DEPDC4-005
DEPDC4-007
DEPDC4-008

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
DEPDC4-001
ENSP00000396234
ENST00000416321
Q8N2C3 [Direct mapping]
DEP domain-containing protein 4
A0A024RBI9 [Target identity:100%; Query identity:100%]
DEP domain containing 4, isoform CRA_a
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Predicted intracellular proteins
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GO:0005622 [intracellular]
GO:0035556 [intracellular signal transduction]
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 294 aa
33.7 kDa 		No 0
DEPDC4-002
ENSP00000448385
ENST00000550587
E9PGM3 [Direct mapping]
DEP domain-containing protein 4
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Predicted intracellular proteins
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GO:0005622 [intracellular]
GO:0035556 [intracellular signal transduction]
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 387 aa
44.7 kDa 		No 0
DEPDC4-005
ENSP00000448338
ENST00000549249
Q3ZCN8 [Direct mapping]
DEP domain-containing protein 4; DEPDC4 protein
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Predicted intracellular proteins
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GO:0005622 [intracellular]
GO:0035556 [intracellular signal transduction]
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 333 aa
38.6 kDa 		No 0
DEPDC4-007
ENSP00000449590
ENST00000551642
H0YIL0 [Direct mapping]
DEP domain-containing protein 4
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Predicted intracellular proteins
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GO:0005622 [intracellular]
GO:0035556 [intracellular signal transduction]
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 286 aa
32.8 kDa 		No 0
DEPDC4-008
ENSP00000448728
ENST00000548313
H0YI71 [Direct mapping]
DEP domain-containing protein 4
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Predicted intracellular proteins
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 105 aa
11.8 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.