We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
MARS
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:22.9TPM
GTEx:22.5RPKM
FANTOM5:30.9Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Glandular cells:High
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA004125

 

Antibody CAB017097

 

Adipocytes

Low   Low  

Glandular cells

Medium   High  

Myoepithelial cells

Medium   Medium  
   
   
   

BREAST - HPA RNA-seq

Average TPM

22.9

overview Female, age 52
Sample 1
TPM: 16.3
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 25.6
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 27.1
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 22.4
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

22.5

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 22.5
Samples: 214

Max RPKM: 69
Min RPKM: 9.2
Std RPKM: 7.1
Median RPKM: 21.1
GTEX-X4XY-0926-SM-4E3JD 69.0
GTEX-11WQK-2426-SM-5GU5C 53.0
GTEX-XYKS-1326-SM-4BRUN 52.7
GTEX-RUSQ-2026-SM-4GIAK 48.8
GTEX-QEG5-0726-SM-4R1JQ 42.3
GTEX-ZTTD-1026-SM-51MRD 40.5
GTEX-13CF3-2126-SM-5IFJP 39.1
GTEX-11DZ1-0326-SM-5N9BN 39.0
GTEX-13S86-1226-SM-5S2OA 35.9
GTEX-XUZC-1626-SM-4BRVP 34.6
GTEX-VUSG-2226-SM-4KKZO 34.4
GTEX-13O3O-0826-SM-5K7WE 33.7
GTEX-ZU9S-1926-SM-5NQBP 33.5
GTEX-1117F-2826-SM-5GZXL 32.0
GTEX-U8XE-0826-SM-4E3J1 31.6
GTEX-13NZ9-1026-SM-5MR5K 31.5
GTEX-QEL4-2126-SM-447AE 31.5
GTEX-11P82-1326-SM-5HL62 30.8
GTEX-XV7Q-2326-SM-4BRVZ 30.8
GTEX-SIU7-1626-SM-4BRUK 30.3
GTEX-ZAJG-0626-SM-5HL8X 29.9
GTEX-X261-0626-SM-3NMD9 29.8
GTEX-ZY6K-1626-SM-5GZWV 29.8
GTEX-11TT1-2126-SM-5GU5Y 29.4
GTEX-14ABY-2126-SM-5QGQZ 29.2
GTEX-T6MN-0726-SM-32PML 29.1
GTEX-WOFL-0826-SM-3MJG1 28.1
GTEX-R3RS-0626-SM-48FE1 27.7
GTEX-T5JW-2026-SM-4DM63 27.7
GTEX-11I78-2226-SM-5PNYA 27.6
GTEX-11EMC-2026-SM-5A5JV 27.4
GTEX-13CF2-2026-SM-5K7VI 27.3
GTEX-ZV7C-1826-SM-5NQ83 27.3
GTEX-13FTY-2226-SM-5J1ND 26.9
GTEX-Y5V6-2126-SM-4WWFX 26.9
GTEX-SE5C-2126-SM-4BRUJ 26.8
GTEX-Y114-2026-SM-4TT7L 26.7
GTEX-REY6-2426-SM-48FF5 26.5
GTEX-13OW5-2226-SM-5L3HC 26.1
GTEX-13W3W-1226-SM-5LU4H 26.1
GTEX-ZDYS-1126-SM-5K7UB 26.1
GTEX-T2YK-2226-SM-32QPT 26.0
GTEX-TKQ2-1826-SM-33HB2 26.0
GTEX-11GS4-2126-SM-5A5KR 25.9
GTEX-133LE-1726-SM-5K7VQ 25.8
GTEX-13O3Q-2226-SM-5KM4O 25.8
GTEX-13W46-0826-SM-5LU3H 25.8
GTEX-132AR-0826-SM-5EGK6 25.6
GTEX-S341-1526-SM-4AD6K 25.5
GTEX-ZYWO-2326-SM-5GZY4 25.5
GTEX-YFC4-1426-SM-5IFJG 25.4
GTEX-13NZB-2126-SM-5MR4Y 25.3
GTEX-13D11-1026-SM-5IJFB 25.2
GTEX-11TUW-1826-SM-5BC5D 25.1
GTEX-T5JC-2126-SM-32PMO 25.1
GTEX-R55D-0826-SM-48FEA 24.7
GTEX-ZLV1-1426-SM-4WWES 24.7
GTEX-146FH-0826-SM-5SI8T 24.5
GTEX-13N11-1726-SM-5J1OJ 24.3
GTEX-13NZ8-0126-SM-5IJCT 24.3
GTEX-S32W-2026-SM-4AD6E 24.3
GTEX-YFCO-1826-SM-4W1YH 24.2
GTEX-T2IS-1526-SM-32QPR 24.1
GTEX-13O3P-0826-SM-5L3DH 24.0
GTEX-13PVQ-1026-SM-5KM3M 24.0
GTEX-U3ZH-1426-SM-4DXSR 24.0
GTEX-XQ8I-2426-SM-4WAXY 24.0
GTEX-11PRG-0826-SM-5EQ6A 23.9
GTEX-12ZZX-1126-SM-5EGKB 23.8
GTEX-12WSN-1326-SM-5GCNT 23.7
GTEX-ZWKS-2826-SM-5NQ74 23.6
GTEX-11DXW-0626-SM-5N9ER 23.5
GTEX-145MO-0826-SM-5NQBL 23.4
GTEX-ZVT2-1826-SM-5NQ8W 23.4
GTEX-R53T-1526-SM-48FEK 23.3
GTEX-X15G-1626-SM-3NMB3 23.1
GTEX-XOT4-0726-SM-4GIAW 23.0
GTEX-1122O-1226-SM-5H113 22.9
GTEX-YEC3-1026-SM-5IFI5 22.9
GTEX-147F4-2826-SM-5NQBN 22.8
GTEX-UPK5-2326-SM-3P5Z8 22.7
GTEX-XUW1-2326-SM-4BOO5 22.5
GTEX-11ONC-2126-SM-5HL6E 22.4
GTEX-13PL6-2926-SM-5L3I2 22.4
GTEX-XGQ4-0926-SM-4AT4U 22.4
GTEX-Y5LM-1726-SM-4VDSX 22.4
GTEX-139TU-0626-SM-5KM3X 22.3
GTEX-Q2AG-0326-SM-48U1O 22.3
GTEX-XQ3S-1326-SM-4BOPQ 22.3
GTEX-14E6E-1326-SM-5S2NR 22.2
GTEX-S4Q7-1126-SM-4AD6R 22.2
GTEX-11P7K-0726-SM-5EGKX 22.1
GTEX-1269C-2426-SM-5FQSN 22.1
GTEX-1399U-1826-SM-5PNZ1 22.1
GTEX-RU72-0626-SM-46MUI 22.1
GTEX-ZVTK-0326-SM-51MRR 22.1
GTEX-TMMY-0726-SM-33HBE 21.9
GTEX-XMD2-0926-SM-4WWEF 21.9
GTEX-UJHI-1426-SM-3DB9C 21.7
GTEX-ZLFU-2126-SM-4WWEV 21.7
GTEX-13O61-1826-SM-5KM4I 21.6
GTEX-R55F-1726-SM-2TF4R 21.5
GTEX-WI4N-1426-SM-3LK7H 21.5
GTEX-QDT8-0626-SM-48TYW 21.4
GTEX-11WQC-1726-SM-5GU4W 21.3
GTEX-WYVS-1726-SM-3NMAY 21.3
GTEX-Y111-2026-SM-4SOJA 21.2
GTEX-14AS3-1626-SM-5S2OY 21.1
GTEX-1192X-2326-SM-5987X 21.0
GTEX-11LCK-2426-SM-5HL5F 21.0
GTEX-11NSD-0926-SM-5N9DR 21.0
GTEX-12WSM-1726-SM-5BC6J 20.8
GTEX-WXYG-2226-SM-4E3IM 20.8
GTEX-U3ZN-1926-SM-4DXSG 20.7
GTEX-131YS-0626-SM-5EGKL 20.6
GTEX-13N1W-0626-SM-5MR4U 20.6
GTEX-UTHO-1026-SM-3GAF7 20.6
GTEX-VJWN-0726-SM-3GIJ8 20.6
GTEX-YB5K-1626-SM-5IFIN 20.6
GTEX-RWS6-1926-SM-47JXY 20.5
GTEX-ZA64-1526-SM-5CVMD 20.5
GTEX-S4P3-1326-SM-4AD6V 20.4
GTEX-111YS-1926-SM-5GICC 20.3
GTEX-11EI6-0626-SM-5985T 20.3
GTEX-TML8-1226-SM-32QON 20.2
GTEX-145LT-0726-SM-5S2VM 20.1
GTEX-T6MO-0326-SM-32QOK 20.1
GTEX-Y5V5-2126-SM-4WWFO 20.1
GTEX-ZV6S-1826-SM-5NQ8D 20.1
GTEX-S33H-0326-SM-4AD6N 20.0
GTEX-ZF29-1926-SM-5S2P1 20.0
GTEX-QVJO-1826-SM-447C9 19.9
GTEX-1211K-1926-SM-5EQLB 19.8
GTEX-X4EP-2926-SM-3P5YQ 19.7
GTEX-XUJ4-1926-SM-4BOOV 19.7
GTEX-S7SE-0826-SM-4AT4D 19.6
GTEX-ZYFC-0826-SM-5E44K 19.6
GTEX-11ZTT-2326-SM-5EQLG 19.5
GTEX-144GM-0926-SM-5O994 19.5
GTEX-WRHU-0326-SM-3MJFY 19.5
GTEX-ZC5H-2626-SM-5J2MG 19.5
GTEX-ZVE2-1226-SM-5NQ8R 19.5
GTEX-1313W-0826-SM-5EQ4T 19.4
GTEX-ZTX8-1226-SM-4YCE9 19.4
GTEX-139T8-0826-SM-5L3DE 19.3
GTEX-WY7C-2726-SM-3NB3P 19.2
GTEX-ZZPU-0626-SM-5E43T 19.2
GTEX-ZF2S-2026-SM-5E461 19.1
GTEX-WYJK-1326-SM-3NB2T 19.0
GTEX-ZDXO-0126-SM-5S2ND 18.9
GTEX-Y8LW-1626-SM-5IFHX 18.8
GTEX-ZEX8-2226-SM-57WC6 18.7
GTEX-13OW8-0226-SM-5K7UP 18.6
GTEX-ZT9W-2026-SM-51MRA 18.6
GTEX-11O72-2126-SM-5N9FO 18.5
GTEX-144GL-2026-SM-5LU3O 18.5
GTEX-12WSB-0626-SM-59HJO 18.4
GTEX-13113-1726-SM-5GCOO 18.4
GTEX-YJ8O-2226-SM-5IFHW 18.4
GTEX-ZYW4-0826-SM-5GIDG 18.4
GTEX-132Q8-1426-SM-5EGK7 18.3
GTEX-Y3IK-2326-SM-4WWDT 18.1
GTEX-XBED-1626-SM-47JYN 18.0
GTEX-11P81-1926-SM-5BC53 17.9
GTEX-11ZUS-0826-SM-5FQUY 17.9
GTEX-13FTX-1126-SM-5N9EN 17.8
GTEX-12BJ1-1826-SM-5HL9N 17.7
GTEX-11DXY-2326-SM-5GICW 17.6
GTEX-ZYT6-0126-SM-5E45J 17.6
GTEX-TKQ1-0226-SM-33HB5 17.5
GTEX-117YX-1426-SM-5H12H 17.3
GTEX-145ME-1526-SM-5Q5F2 17.3
GTEX-ZVZQ-0826-SM-51MRF 17.3
GTEX-ZZ64-1226-SM-5E43R 17.3
GTEX-Y8E4-1626-SM-5S2MW 17.2
GTEX-ZDTT-2126-SM-5S2OJ 17.1
GTEX-11NV4-2026-SM-5N9DG 17.0
GTEX-ZXES-0826-SM-5E43C 16.9
GTEX-13FTW-1426-SM-5LZWZ 16.8
GTEX-S4UY-0726-SM-4AD6X 16.8
GTEX-U412-1826-SM-4DXTJ 16.8
GTEX-WYBS-0926-SM-3NM94 16.8
GTEX-Y3I4-1526-SM-4TT7K 16.8
GTEX-11EQ9-1826-SM-5Q5AJ 16.7
GTEX-11OF3-1926-SM-59889 16.6
GTEX-QMRM-1626-SM-4R1KV 16.6
GTEX-Y9LG-1426-SM-5IFJZ 16.6
GTEX-ZPIC-1126-SM-5BC7F 16.6
GTEX-ZUA1-1526-SM-59HLS 16.5
GTEX-145MN-1926-SM-5SIAI 16.4
GTEX-PSDG-1626-SM-48TCQ 16.4
GTEX-11GSO-1926-SM-5A5K3 16.3
GTEX-12KS4-0126-SM-5Q5A5 16.3
GTEX-ZQUD-1926-SM-51MSA 16.2
GTEX-132NY-0826-SM-5K7Y7 15.4
GTEX-13QIC-2326-SM-5LU5N 15.4
GTEX-11EM3-1326-SM-5N9C6 15.1
GTEX-XMD1-0826-SM-4AT52 15.1
GTEX-ZQG8-0726-SM-5P9H9 15.0
GTEX-W5X1-2326-SM-3GIL6 14.8
GTEX-139T6-1626-SM-5PNYZ 14.7
GTEX-ZAB4-2526-SM-5HL8M 14.7
GTEX-13FHO-0826-SM-5L3E8 14.6
GTEX-YB5E-1726-SM-5IFJ3 14.4
GTEX-1314G-1226-SM-5BC6D 13.9
GTEX-ZVT4-1026-SM-57WC4 13.9
GTEX-14753-2426-SM-5LU8U 13.5
GTEX-12WSK-2226-SM-5GCO5 13.4
GTEX-11DXZ-1926-SM-5GZZL 13.3
GTEX-ZF3C-2326-SM-5S2MZ 13.1
GTEX-131XW-0726-SM-5EGK3 12.6
GTEX-117XS-1926-SM-5GICO 11.7
GTEX-WFON-1826-SM-3GILG 11.6
GTEX-XMK1-1126-SM-4IHJ8 9.2
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

30.9

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 30.9
FF:10080-102A8 77 years, female 30.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.