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Term
Gene name

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Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

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Searches

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Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA ENDOMETRIUM
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Endometrium

Tissue proteome

Endometrium

ENDOMETRIUM - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:31.3TPM
GTEx:27.3RPKM
FANTOM5:42.9Tags Per Million

ENDOMETRIUM 1 - Annotated protein expression

Annotated protein
expression

Cells in endometrial stroma:Medium
Glandular cells:High
 

Antibody staining

Antibody HPA004125

 

Antibody CAB017097

 

Cells in endometrial stroma

Not detected   Medium  

Glandular cells

Medium   High  
   
   
   

ENDOMETRIUM 2 - Annotated protein expression

Annotated protein
expression

Cells in endometrial stroma:Low
Glandular cells:Medium
 

Antibody staining

Antibody HPA004125

 

Antibody CAB017097

 

Cells in endometrial stroma

Low   Low  

Glandular cells

Medium   Medium  
   
   
   

ENDOMETRIUM - HPA RNA-seq

Average TPM

31.3

overview Female, age 34
Sample 1
TPM: 29.6
Cell types%
Glandular cells: 5
Stromal cells: 25
Smooth muscle cells: 65
Other cell types: 5
overview Female, age 56
Sample 2
TPM: 27.9
Cell types%
Glandular cells: 5
Stromal cells: 15
Smooth muscle cells: 75
Other cell types: 5
overview Female, age 40
Sample 3
TPM: 40.7
Cell types%
Glandular cells: 5
Stromal cells: 20
Smooth muscle cells: 70
Other cell types: 5
overview Female, age 60
Sample 4
TPM: 28.0
Cell types%
Glandular cells: 5
Stromal cells: 20
Smooth muscle cells: 75
Other cell types: 0
overview Female, age 83
Sample 5
TPM: 30.2
Cell types%
Glandular cells: 5
Stromal cells: 10
Smooth muscle cells: 80
Other cell types: 5

ENDOMETRIUM - GTEx RNA-seq

Average RPKM

27.3

GTEx sample id

RPKM

21.526.130.219.040.10510152025303540
 
21.526.130.219.040.10510152025303540

Uterus - Endometrium

Uterus - Endometrium
RPKM: 27.3
Samples: 14

Max RPKM: 40.1
Min RPKM: 19
Std RPKM: 6.9
Median RPKM: 26.1
GTEX-R55G-1626-SM-48FF4 40.1
GTEX-S32W-1426-SM-4AD66 38.5
GTEX-ZTPG-2026-SM-5O999 38.0
GTEX-T5JW-1526-SM-4DM5E 30.4
GTEX-XUZC-0926-SM-4BOQF 29.7
GTEX-ZVT2-0426-SM-5E44S 27.7
GTEX-PWN1-2026-SM-48TD9 26.5
GTEX-PX3G-2026-SM-48U1H 25.7
GTEX-P78B-2526-SM-3P5ZY 22.9
GTEX-Y114-1826-SM-4TT87 22.0
GTEX-T6MO-1526-SM-4DM57 21.4
GTEX-13QBU-1626-SM-5LU4S 20.7
GTEX-11EM3-1926-SM-5987U 20.0
GTEX-U3ZN-0726-SM-4DXT5 19.0
Show all

ENDOMETRIUM - FANTOM5 CAGE

Average Tags Per Million

42.9

FANTOM5 sample id

Sample description

Tags Per Million

Uterus
Tags Per Million: 42.9
FF:10100-102D1 23-63 years, female 42.9

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