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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:13.3RPKM
FANTOM5:71.2Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:High
 

Antibody staining

Antibody HPA004125

 

Antibody CAB017097

 

Glial cells

Not detected   Medium  

Neuronal cells

Medium   High  
   
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

13.3

GTEx sample id

RPKM

8.512.617.32.830.0024681012141618202224262830
 
8.512.617.32.830.0024681012141618202224262830

Brain - Hippocampus

Brain - Hippocampus
RPKM: 13.3
Samples: 94

Max RPKM: 30
Min RPKM: 2.8
Std RPKM: 6
Median RPKM: 12.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 30.0
GTEX-13JUV-0011-R1a-SM-5LZY4 27.1
GTEX-WWYW-0011-R1A-SM-3TW8G 26.4
GTEX-X585-0011-R1B-SM-46MVE 26.3
GTEX-131XH-0011-R1a-SM-5DUWA 24.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 23.8
GTEX-RNOR-0011-R1A-SM-5SI8F 23.3
GTEX-WL46-0011-R1A-SM-3LK6M 21.5
GTEX-X4XX-0011-R1B-SM-3P622 21.4
GTEX-13G51-0011-R1a-SM-5LZYR 21.3
GTEX-N7MS-0011-R1a-SM-2HMJG 20.9
GTEX-12WSF-0011-R1a-SM-5DUVI 20.0
GTEX-T5JC-0011-R1A-SM-32PM6 19.9
GTEX-145MH-0011-R1b-SM-5PNWY 19.8
GTEX-13O3O-0011-R1b-SM-5KM2K 19.8
GTEX-13N1W-0011-R1b-SM-5MR4T 18.7
GTEX-YFC4-0011-R1a-SM-4V6EH 18.6
GTEX-PVOW-0011-R1A-SM-32PL6 18.6
GTEX-13OW6-0011-R1a-SM-5L3HQ 18.5
GTEX-T6MN-0011-R1A-SM-32QOY 18.4
GTEX-N7MT-0011-R1a-SM-5SI7S 17.6
GTEX-1313W-0011-R1b-SM-5EQ4A 17.5
GTEX-13NYS-0011-R1b-SM-5MR55 17.5
GTEX-139TT-0011-R1a-SM-5LZVD 17.4
GTEX-R55E-0011-R1A-SM-2TC6N 17.2
GTEX-UTHO-0011-R1A-SM-3GIJO 17.2
GTEX-QVJO-0011-R1A-SM-2S1QI 16.9
GTEX-12WSE-0011-R1b-SM-5GU4V 16.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 16.8
GTEX-ZAB4-0011-R1a-SM-4RGNO 16.8
GTEX-QVUS-0011-R1A-SM-3GAD2 16.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 16.6
GTEX-13OW5-0011-R1b-SM-5L3GE 16.5
GTEX-QDT8-0011-R1A-SM-32PKS 16.3
GTEX-WZTO-0011-R1B-SM-3NMAR 15.9
GTEX-13FXS-0011-R1a-SM-5K7U6 15.8
GTEX-XOTO-0011-R1B-SM-4B65C 15.8
GTEX-13N2G-0011-R1b-SM-5MR3G 15.7
GTEX-P44H-0011-R1A-SM-3NM8J 14.3
GTEX-ZUA1-0011-R1a-SM-4YCE2 14.1
GTEX-WVLH-0011-R1A-SM-4MVOK 13.7
GTEX-13FLW-0011-R1b-SM-5LZX2 13.6
GTEX-131YS-0011-R1a-SM-5DUXC 13.5
GTEX-13X6I-0011-R1b-SM-5PNZC 13.3
GTEX-NPJ7-0011-R1a-SM-3GACT 13.1
GTEX-13PDP-0011-R1a-SM-5PNX5 13.1
GTEX-13NYB-0011-R1b-SM-5KM4F 12.7
GTEX-14ASI-0011-R1b-SM-5S2TY 12.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 12.4
GTEX-S7SE-0011-R1A-SM-2XCDE 12.1
GTEX-12WSD-0011-R1b-SM-5LZVY 12.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 11.8
GTEX-132Q8-0011-R1a-SM-5EGLK 11.6
GTEX-145LS-0011-R1b-SM-5PNUP 11.5
GTEX-XMD1-0011-R1A-SM-4AT4C 11.4
GTEX-13FHO-0011-R1b-SM-5KLZG 11.3
GTEX-11GSO-0011-R1b-SM-57WD3 11.2
GTEX-13OVL-0011-R1a-SM-5L3H5 11.2
GTEX-11ONC-0011-R1a-SM-57WD4 11.2
GTEX-NPJ8-0011-R1a-SM-33HCB 11.0
GTEX-13S7M-0011-R1b-SM-5PNZE 10.8
GTEX-12WSM-0011-R1a-SM-5LZW6 10.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 9.7
GTEX-TSE9-0011-R1A-SM-3DB7E 9.7
GTEX-13QJC-0011-R1b-SM-5S2UU 9.6
GTEX-13OW8-0011-R1a-SM-5L3HI 9.1
GTEX-12WSH-0011-R1a-SM-5GU5V 8.8
GTEX-144GL-0011-R1a-SM-5PNZ5 8.8
GTEX-1399T-0011-R1b-SM-5DUWN 8.6
GTEX-13112-0011-R1b-SM-5HL7K 8.6
GTEX-13JVG-0011-R1a-SM-5KM32 8.5
GTEX-PWO3-0011-R1A-SM-2I5EW 8.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 8.2
GTEX-13SLW-0011-R1a-SM-5S2W7 8.0
GTEX-1212Z-0011-R1b-SM-5BC72 7.8
GTEX-13OW7-0011-R1b-SM-5L3HF 7.8
GTEX-12WSB-0011-R1b-SM-5P9EY 7.4
GTEX-11UD1-0011-R1b-SM-5BC7D 7.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 6.9
GTEX-QMR6-0011-R1A-SM-32PKW 6.9
GTEX-NL3H-0011-R1a-SM-48TDJ 6.5
GTEX-11ZVC-0011-R1b-SM-5BC6M 6.2
GTEX-13NZA-0011-R1b-SM-5LUAF 6.0
GTEX-YJ89-0011-R1a-SM-4RGLS 5.8
GTEX-11ZTS-0011-R1a-SM-5BC71 5.6
GTEX-139T8-0011-R1a-SM-5HL75 5.0
GTEX-ZF28-0011-R1a-SM-4WWD1 5.0
GTEX-ZVZQ-0011-R1a-SM-57WBU 4.7
GTEX-13FHP-0011-R1b-SM-5K7XL 4.6
GTEX-13CF2-0011-R1a-SM-5LZY1 4.5
GTEX-144GO-0011-R1a-SM-5PNWO 4.4
GTEX-13FTY-0011-R1a-SM-5LZXE 3.7
GTEX-145LU-0011-R1a-SM-5Q5CE 3.0
GTEX-ZE7O-0011-R1a-SM-57WDM 2.8
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

71.2

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 71.2
FF:10153-102I9 76 years, female 85.3
FF:10169-103B7 60 years, female 79.4
FF:10374-105G5 89 years, female 48.7

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