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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:227.2TPM
GTEx:57.6RPKM
FANTOM5:128.1Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Glandular cells:High
Myoepithelial cells:High
 

Antibody staining

Antibody HPA039247

 

Antibody HPA043684

 

Antibody HPA063394

 

Antibody CAB008686

 

Adipocytes

Medium   Not detected   Not detected   Medium  

Glandular cells

High   Not detected   Medium   High  

Myoepithelial cells

High   Not detected   Medium   High  
       
       
       

BREAST - HPA RNA-seq

Average TPM

227.2

overview Female, age 52
Sample 1
TPM: 202.8
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 436.3
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 184.8
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 85.0
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

57.6

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 57.6
Samples: 214

Max RPKM: 138.8
Min RPKM: 15.2
Std RPKM: 23
Median RPKM: 54.9
GTEX-YJ8O-2226-SM-5IFHW 138.8
GTEX-TKQ1-0226-SM-33HB5 134.6
GTEX-T2IS-1526-SM-32QPR 132.3
GTEX-T5JW-2026-SM-4DM63 121.6
GTEX-11TT1-2126-SM-5GU5Y 117.0
GTEX-XYKS-1326-SM-4BRUN 114.1
GTEX-XOT4-0726-SM-4GIAW 109.9
GTEX-ZVZQ-0826-SM-51MRF 108.7
GTEX-14ABY-2126-SM-5QGQZ 108.4
GTEX-WRHU-0326-SM-3MJFY 105.9
GTEX-13S86-1226-SM-5S2OA 104.3
GTEX-S33H-0326-SM-4AD6N 99.3
GTEX-132AR-0826-SM-5EGK6 99.2
GTEX-12WSN-1326-SM-5GCNT 97.6
GTEX-132NY-0826-SM-5K7Y7 97.0
GTEX-11EQ9-1826-SM-5Q5AJ 95.6
GTEX-11WQC-1726-SM-5GU4W 94.4
GTEX-145LT-0726-SM-5S2VM 93.8
GTEX-11DXW-0626-SM-5N9ER 92.9
GTEX-ZEX8-2226-SM-57WC6 92.7
GTEX-11GS4-2126-SM-5A5KR 91.3
GTEX-ZY6K-1626-SM-5GZWV 90.0
GTEX-VUSG-2226-SM-4KKZO 88.2
GTEX-11PRG-0826-SM-5EQ6A 88.1
GTEX-T6MN-0726-SM-32PML 87.8
GTEX-13NZ9-1026-SM-5MR5K 86.6
GTEX-UPK5-2326-SM-3P5Z8 85.4
GTEX-ZTX8-1226-SM-4YCE9 85.2
GTEX-13W3W-1226-SM-5LU4H 84.8
GTEX-ZU9S-1926-SM-5NQBP 81.4
GTEX-S32W-2026-SM-4AD6E 80.8
GTEX-13CF2-2026-SM-5K7VI 79.9
GTEX-WOFL-0826-SM-3MJG1 79.9
GTEX-XBED-1626-SM-47JYN 78.3
GTEX-Y3I4-1526-SM-4TT7K 78.3
GTEX-XQ3S-1326-SM-4BOPQ 78.0
GTEX-ZYWO-2326-SM-5GZY4 77.4
GTEX-S341-1526-SM-4AD6K 77.3
GTEX-ZYFC-0826-SM-5E44K 76.9
GTEX-XV7Q-2326-SM-4BRVZ 74.1
GTEX-11NSD-0926-SM-5N9DR 73.7
GTEX-ZVT4-1026-SM-57WC4 73.1
GTEX-13113-1726-SM-5GCOO 72.6
GTEX-146FH-0826-SM-5SI8T 72.2
GTEX-11P7K-0726-SM-5EGKX 71.7
GTEX-ZDXO-0126-SM-5S2ND 70.8
GTEX-Y5V6-2126-SM-4WWFX 70.7
GTEX-1122O-1226-SM-5H113 70.6
GTEX-14AS3-1626-SM-5S2OY 70.2
GTEX-X15G-1626-SM-3NMB3 70.0
GTEX-ZTTD-1026-SM-51MRD 69.9
GTEX-TKQ2-1826-SM-33HB2 69.8
GTEX-ZA64-1526-SM-5CVMD 69.5
GTEX-U3ZN-1926-SM-4DXSG 68.9
GTEX-UJHI-1426-SM-3DB9C 68.5
GTEX-13QIC-2326-SM-5LU5N 67.9
GTEX-11DXY-2326-SM-5GICW 67.5
GTEX-Y114-2026-SM-4TT7L 67.5
GTEX-ZDYS-1126-SM-5K7UB 67.2
GTEX-145MN-1926-SM-5SIAI 66.7
GTEX-ZZPU-0626-SM-5E43T 66.6
GTEX-SE5C-2126-SM-4BRUJ 66.2
GTEX-Y3IK-2326-SM-4WWDT 65.9
GTEX-13FHO-0826-SM-5L3E8 65.3
GTEX-QEL4-2126-SM-447AE 65.2
GTEX-12WSM-1726-SM-5BC6J 64.8
GTEX-ZVT2-1826-SM-5NQ8W 64.5
GTEX-139TU-0626-SM-5KM3X 64.4
GTEX-Y8E4-1626-SM-5S2MW 64.3
GTEX-ZVTK-0326-SM-51MRR 64.3
GTEX-TML8-1226-SM-32QON 63.6
GTEX-S4Q7-1126-SM-4AD6R 63.2
GTEX-11P81-1926-SM-5BC53 62.8
GTEX-144GL-2026-SM-5LU3O 62.8
GTEX-11O72-2126-SM-5N9FO 62.5
GTEX-11ONC-2126-SM-5HL6E 62.2
GTEX-1269C-2426-SM-5FQSN 62.2
GTEX-13D11-1026-SM-5IJFB 61.7
GTEX-WYJK-1326-SM-3NB2T 61.5
GTEX-SIU7-1626-SM-4BRUK 61.2
GTEX-Q2AG-0326-SM-48U1O 61.0
GTEX-13O3Q-2226-SM-5KM4O 60.4
GTEX-ZT9W-2026-SM-51MRA 59.7
GTEX-ZUA1-1526-SM-59HLS 59.1
GTEX-Y111-2026-SM-4SOJA 59.0
GTEX-13N11-1726-SM-5J1OJ 58.8
GTEX-ZV7C-1826-SM-5NQ83 58.8
GTEX-14E6E-1326-SM-5S2NR 58.7
GTEX-PSDG-1626-SM-48TCQ 58.5
GTEX-111YS-1926-SM-5GICC 58.1
GTEX-R53T-1526-SM-48FEK 57.9
GTEX-12ZZX-1126-SM-5EGKB 57.4
GTEX-11EI6-0626-SM-5985T 57.1
GTEX-WXYG-2226-SM-4E3IM 57.0
GTEX-117YX-1426-SM-5H12H 56.8
GTEX-QDT8-0626-SM-48TYW 56.8
GTEX-ZLV1-1426-SM-4WWES 56.8
GTEX-11NV4-2026-SM-5N9DG 56.4
GTEX-1399U-1826-SM-5PNZ1 56.4
GTEX-TMMY-0726-SM-33HBE 56.0
GTEX-QEG5-0726-SM-4R1JQ 55.8
GTEX-XUW1-2326-SM-4BOO5 55.8
GTEX-S7SE-0826-SM-4AT4D 55.6
GTEX-13FTY-2226-SM-5J1ND 55.2
GTEX-YFCO-1826-SM-4W1YH 55.2
GTEX-13OW8-0226-SM-5K7UP 55.1
GTEX-U8XE-0826-SM-4E3J1 54.9
GTEX-1314G-1226-SM-5BC6D 54.8
GTEX-S4P3-1326-SM-4AD6V 54.7
GTEX-Y5V5-2126-SM-4WWFO 53.6
GTEX-12WSK-2226-SM-5GCO5 53.2
GTEX-11LCK-2426-SM-5HL5F 53.1
GTEX-13O3O-0826-SM-5K7WE 52.4
GTEX-U3ZH-1426-SM-4DXSR 52.4
GTEX-WY7C-2726-SM-3NB3P 52.4
GTEX-11OF3-1926-SM-59889 51.9
GTEX-ZC5H-2626-SM-5J2MG 51.8
GTEX-1117F-2826-SM-5GZXL 51.6
GTEX-WFON-1826-SM-3GILG 51.3
GTEX-ZPIC-1126-SM-5BC7F 50.9
GTEX-139T8-0826-SM-5L3DE 50.6
GTEX-Y8LW-1626-SM-5IFHX 50.6
GTEX-11DXZ-1926-SM-5GZZL 50.5
GTEX-133LE-1726-SM-5K7VQ 50.0
GTEX-1211K-1926-SM-5EQLB 49.9
GTEX-131YS-0626-SM-5EGKL 49.9
GTEX-VJWN-0726-SM-3GIJ8 49.5
GTEX-WYVS-1726-SM-3NMAY 49.1
GTEX-147F4-2826-SM-5NQBN 48.8
GTEX-S4UY-0726-SM-4AD6X 48.8
GTEX-QVJO-1826-SM-447C9 48.7
GTEX-ZDTT-2126-SM-5S2OJ 47.6
GTEX-R55D-0826-SM-48FEA 47.5
GTEX-WYBS-0926-SM-3NM94 47.4
GTEX-ZF2S-2026-SM-5E461 47.4
GTEX-ZF29-1926-SM-5S2P1 47.2
GTEX-13OW5-2226-SM-5L3HC 47.1
GTEX-XUJ4-1926-SM-4BOOV 47.1
GTEX-ZLFU-2126-SM-4WWEV 47.0
GTEX-XGQ4-0926-SM-4AT4U 46.9
GTEX-11ZTT-2326-SM-5EQLG 46.6
GTEX-RWS6-1926-SM-47JXY 46.6
GTEX-1192X-2326-SM-5987X 46.5
GTEX-ZV6S-1826-SM-5NQ8D 45.7
GTEX-12WSB-0626-SM-59HJO 45.5
GTEX-13O3P-0826-SM-5L3DH 45.3
GTEX-ZXES-0826-SM-5E43C 45.1
GTEX-117XS-1926-SM-5GICO 44.8
GTEX-RU72-0626-SM-46MUI 44.8
GTEX-YFC4-1426-SM-5IFJG 44.6
GTEX-11ZUS-0826-SM-5FQUY 44.3
GTEX-1313W-0826-SM-5EQ4T 44.3
GTEX-139T6-1626-SM-5PNYZ 44.3
GTEX-XQ8I-2426-SM-4WAXY 44.1
GTEX-11EM3-1326-SM-5N9C6 43.9
GTEX-11I78-2226-SM-5PNYA 43.9
GTEX-ZF3C-2326-SM-5S2MZ 43.9
GTEX-Y9LG-1426-SM-5IFJZ 43.8
GTEX-13FTW-1426-SM-5LZWZ 43.6
GTEX-131XW-0726-SM-5EGK3 43.1
GTEX-13NZB-2126-SM-5MR4Y 42.6
GTEX-REY6-2426-SM-48FF5 42.1
GTEX-RUSQ-2026-SM-4GIAK 41.9
GTEX-11EMC-2026-SM-5A5JV 41.6
GTEX-ZZ64-1226-SM-5E43R 41.5
GTEX-144GM-0926-SM-5O994 40.4
GTEX-145MO-0826-SM-5NQBL 40.2
GTEX-ZYT6-0126-SM-5E45J 40.0
GTEX-T5JC-2126-SM-32PMO 39.8
GTEX-WI4N-1426-SM-3LK7H 39.8
GTEX-13CF3-2126-SM-5IFJP 39.7
GTEX-13FTX-1126-SM-5N9EN 39.7
GTEX-YEC3-1026-SM-5IFI5 38.6
GTEX-ZAB4-2526-SM-5HL8M 38.6
GTEX-W5X1-2326-SM-3GIL6 38.5
GTEX-13PL6-2926-SM-5L3I2 38.1
GTEX-QMRM-1626-SM-4R1KV 38.0
GTEX-13O61-1826-SM-5KM4I 37.9
GTEX-11TUW-1826-SM-5BC5D 37.6
GTEX-13N1W-0626-SM-5MR4U 36.8
GTEX-T6MO-0326-SM-32QOK 36.8
GTEX-XMK1-1126-SM-4IHJ8 36.0
GTEX-X261-0626-SM-3NMD9 35.3
GTEX-ZVE2-1226-SM-5NQ8R 34.6
GTEX-13PVQ-1026-SM-5KM3M 34.3
GTEX-R3RS-0626-SM-48FE1 34.1
GTEX-R55F-1726-SM-2TF4R 33.7
GTEX-YB5E-1726-SM-5IFJ3 33.3
GTEX-ZQUD-1926-SM-51MSA 33.1
GTEX-X4XY-0926-SM-4E3JD 33.0
GTEX-11GSO-1926-SM-5A5K3 32.8
GTEX-XMD2-0926-SM-4WWEF 32.8
GTEX-11P82-1326-SM-5HL62 29.3
GTEX-11DZ1-0326-SM-5N9BN 29.2
GTEX-U412-1826-SM-4DXTJ 28.8
GTEX-Y5LM-1726-SM-4VDSX 28.7
GTEX-YB5K-1626-SM-5IFIN 28.7
GTEX-12BJ1-1826-SM-5HL9N 28.1
GTEX-ZWKS-2826-SM-5NQ74 27.7
GTEX-ZQG8-0726-SM-5P9H9 26.8
GTEX-13NZ8-0126-SM-5IJCT 24.3
GTEX-13W46-0826-SM-5LU3H 24.3
GTEX-UTHO-1026-SM-3GAF7 24.2
GTEX-XMD1-0826-SM-4AT52 24.1
GTEX-XUZC-1626-SM-4BRVP 24.1
GTEX-ZYW4-0826-SM-5GIDG 24.1
GTEX-12KS4-0126-SM-5Q5A5 24.0
GTEX-T2YK-2226-SM-32QPT 23.9
GTEX-145ME-1526-SM-5Q5F2 23.0
GTEX-132Q8-1426-SM-5EGK7 22.7
GTEX-11WQK-2426-SM-5GU5C 22.3
GTEX-X4EP-2926-SM-3P5YQ 21.7
GTEX-ZAJG-0626-SM-5HL8X 21.5
GTEX-14753-2426-SM-5LU8U 15.2
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

128.1

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 128.1
FF:10080-102A8 77 years, female 128.1

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