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TUBA1A
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    TISSUE

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    CELL

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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:232.6RPKM
FANTOM5:1382.7Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:High
 

Antibody staining

Antibody HPA039247

 

Antibody HPA043684

 

Antibody HPA063394

 

Antibody CAB008686

 

Glial cells

Medium   Not detected   Not detected   Not detected  

Neuronal cells

High   High   Low   Medium  
       
       
       

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

232.6

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 232.6
Samples: 117

Max RPKM: 464.3
Min RPKM: 51.6
Std RPKM: 80.1
Median RPKM: 236.1
GTEX-132Q8-0011-R5a-SM-5IJDM 464.3
GTEX-13JUV-0011-R5a-SM-5LZY5 404.1
GTEX-WL46-0011-R5A-SM-3LK6V 403.0
GTEX-13X6K-0011-R5b-SM-5PNUE 402.3
GTEX-13O3O-0011-R5b-SM-5KM44 379.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 362.8
GTEX-12WSB-0011-R5b-SM-5GU67 362.6
GTEX-13NYS-0011-R5a-SM-5MR4D 359.2
GTEX-WHSE-0011-R5A-SM-3P5ZO 348.5
GTEX-13G51-0011-R5a-SM-5L3EB 335.9
GTEX-ZUA1-0011-R5b-SM-51MTG 334.1
GTEX-12WSC-0011-R5b-SM-5CVNS 334.0
GTEX-P44H-0011-R5A-SM-2XCEX 329.7
GTEX-12WSA-0011-R5b-SM-5GU5I 328.2
GTEX-UTHO-0011-R5A-SM-3GIJD 326.1
GTEX-WWYW-0011-R5A-SM-3NB3E 324.6
GTEX-X585-0011-R5A-SM-46MVI 311.6
GTEX-1399T-0011-R5b-SM-5IJDK 309.2
GTEX-13FLV-0011-R5a-SM-5LZWT 303.2
GTEX-N7MS-0011-R5a-SM-2HMK8 299.6
GTEX-1313W-0011-R5b-SM-5L3EP 299.4
GTEX-T6MN-0011-R5A-SM-32QPD 298.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 297.9
GTEX-12WSF-0011-R5a-SM-5HL8K 297.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 297.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 294.6
GTEX-OHPN-0011-R5A-SM-2I5FF 294.3
GTEX-11H98-0011-R5b-SM-57WCF 293.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 289.4
GTEX-N7MT-0011-R5a-SM-2I3G6 286.7
GTEX-131YS-0011-R5b-SM-5K7YB 286.4
GTEX-QVJO-0011-R5A-SM-2S1QM 285.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 285.4
GTEX-145LS-0011-R5a-SM-5SI65 282.9
GTEX-T2IS-0011-R5A-SM-32QP4 280.9
GTEX-145MH-0011-R5a-SM-5P9JT 276.4
GTEX-TSE9-0011-R5A-SM-3DB7J 274.7
GTEX-139TT-0011-R5b-SM-5K7W8 270.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 268.2
GTEX-S7SE-0011-R5A-SM-2XCDA 267.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 266.6
GTEX-13SLX-0011-R5a-SM-5O9BV 266.4
GTEX-11OF3-0011-R5a-SM-57WB4 262.1
GTEX-11NV4-0011-R5a-SM-5NQ88 260.9
GTEX-PVOW-0011-R5A-SM-32PL7 260.7
GTEX-NL4W-0011-R5a-SM-2I3GD 259.5
GTEX-QMR6-0011-R5A-SM-32PKT 257.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 256.5
GTEX-13FXS-0011-R5b-SM-5LZYE 255.7
GTEX-WZTO-0011-R5B-SM-3NMC5 253.7
GTEX-13X6J-0011-R5b-SM-5PNWT 251.0
GTEX-X4XX-0011-R5A-SM-46MWN 250.6
GTEX-11GSP-0011-R5a-SM-57WBE 250.3
GTEX-13VXU-0011-R5a-SM-5O9D7 246.3
GTEX-13NYB-0011-R5a-SM-5MR45 243.8
GTEX-RVPV-0011-R5A-SM-2TF69 242.5
GTEX-RU72-0011-R5A-SM-2TF6U 237.7
GTEX-Z93S-0011-R5b-SM-4RGNI 236.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 236.1
GTEX-13OW6-0011-R5a-SM-5O9BK 234.3
GTEX-13X6I-0011-R5a-SM-5PNWW 231.9
GTEX-14BIM-0011-R5b-SM-5S2RM 231.0
GTEX-139T8-0011-R5b-SM-5J1MO 228.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 228.1
GTEX-XOTO-0011-R5A-SM-4B657 224.9
GTEX-13OW5-0011-R5b-SM-5L3FR 219.7
GTEX-13OVH-0011-R5b-SM-5KM4L 214.9
GTEX-R55E-0011-R5A-SM-2TC5N 213.5
GTEX-WVLH-0011-R5A-SM-3MJFW 212.1
GTEX-13S7M-0011-R5b-SM-5P9HS 210.6
GTEX-13JVG-0011-R5a-SM-5MR4O 210.1
GTEX-XMD1-0011-R5A-SM-4AT47 208.7
GTEX-13OVL-0011-R5b-SM-5L3FU 208.4
GTEX-13OW7-0011-R5b-SM-5O9DM 204.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 203.0
GTEX-14ABY-0011-R5b-SM-5SI7B 199.9
GTEX-ZE7O-0011-R5a-SM-57WBO 199.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 193.6
GTEX-YFC4-0011-R5a-SM-4RGLR 192.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 191.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 188.1
GTEX-12WSH-0011-R5b-SM-5P9F3 187.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 186.8
GTEX-NPJ7-0011-R5a-SM-33HBK 183.7
GTEX-13FLW-0011-R5a-SM-5LZX6 180.5
GTEX-12WSD-0011-R5b-SM-5CVNG 179.0
GTEX-T5JC-0011-R5A-SM-32PLK 172.1
GTEX-139TS-0011-R5b-SM-5J2MZ 167.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 166.1
GTEX-RVPU-0011-R5A-SM-2XCAD 164.8
GTEX-13CZV-0011-R5a-SM-5K7XA 162.7
GTEX-1445S-0011-R5a-SM-5PNUS 160.2
GTEX-14BIN-0011-R5b-SM-5SI78 159.4
GTEX-ZXG5-0011-R5b-SM-57WBN 156.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 155.1
GTEX-X261-0011-R5A-SM-3NMB4 153.5
GTEX-13FHP-0011-R5b-SM-5LZY2 153.2
GTEX-11WQC-0011-R5a-SM-5BC74 149.7
GTEX-144GL-0011-R5b-SM-5PNUJ 149.2
GTEX-ZV68-0011-R5a-SM-4YCDW 146.7
GTEX-13112-0011-R5b-SM-5DUV8 144.7
GTEX-ZVT3-0011-R5a-SM-51MSI 134.5
GTEX-13CIG-0011-R5b-SM-5L3F2 134.3
GTEX-NL3H-0011-R5a-SM-2I3GB 133.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 132.9
GTEX-13CF2-0011-R5a-SM-5LZWS 132.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 132.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 129.6
GTEX-144GO-0011-R5a-SM-5PNUR 123.7
GTEX-12ZZX-0011-R5a-SM-5HL89 120.8
GTEX-OXRN-0011-R5A-SM-2I5EF 111.9
GTEX-YJ89-0011-R5a-SM-4V6GM 94.5
GTEX-1477Z-0011-R5b-SM-5PNUO 93.8
GTEX-S7PM-0011-R5A-SM-3NM8G 81.9
GTEX-11UD1-0011-R5b-SM-5P9FP 74.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60.1
GTEX-145MG-0011-R5b-SM-5S2VU 51.6
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

1382.7

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 1382.7
FF:10379-105H1 89 years, female 1750.6
FF:10164-103B2 76 years, female 1014.8

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