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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:66.6TPM
GTEx:22.6RPKM
FANTOM5:99.1Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Glandular cells:High
Myoepithelial cells:High
 

Antibody staining

Antibody HPA039247

 

Antibody HPA043684

 

Antibody HPA063394

 

Adipocytes

Medium   Not detected   Not detected  

Glandular cells

High   Not detected   Medium  

Myoepithelial cells

High   Not detected   Medium  
     
     
     

BREAST - HPA RNA-seq

Average TPM

66.6

overview Female, age 52
Sample 1
TPM: 51.1
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 101.1
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 47.7
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 66.6
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

22.6

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 22.6
Samples: 214

Max RPKM: 114
Min RPKM: 7
Std RPKM: 14.9
Median RPKM: 18.1
GTEX-11TUW-1826-SM-5BC5D 114.0
GTEX-TKQ1-0226-SM-33HB5 87.8
GTEX-U8XE-0826-SM-4E3J1 79.7
GTEX-13S86-1226-SM-5S2OA 73.9
GTEX-11EQ9-1826-SM-5Q5AJ 68.2
GTEX-RUSQ-2026-SM-4GIAK 67.4
GTEX-13CF3-2126-SM-5IFJP 63.6
GTEX-11TT1-2126-SM-5GU5Y 60.3
GTEX-13PVQ-1026-SM-5KM3M 59.1
GTEX-11WQK-2426-SM-5GU5C 58.6
GTEX-XYKS-1326-SM-4BRUN 49.7
GTEX-S32W-2026-SM-4AD6E 48.9
GTEX-T2IS-1526-SM-32QPR 47.1
GTEX-12WSN-1326-SM-5GCNT 46.8
GTEX-SE5C-2126-SM-4BRUJ 44.3
GTEX-ZLFU-2126-SM-4WWEV 43.4
GTEX-Y5V6-2126-SM-4WWFX 42.4
GTEX-X4XY-0926-SM-4E3JD 41.9
GTEX-ZY6K-1626-SM-5GZWV 39.9
GTEX-14E6E-1326-SM-5S2NR 39.5
GTEX-ZA64-1526-SM-5CVMD 38.6
GTEX-ZT9W-2026-SM-51MRA 38.6
GTEX-REY6-2426-SM-48FF5 38.5
GTEX-132AR-0826-SM-5EGK6 38.4
GTEX-ZTTD-1026-SM-51MRD 37.9
GTEX-13O3O-0826-SM-5K7WE 37.1
GTEX-11ZTT-2326-SM-5EQLG 36.5
GTEX-S4Q7-1126-SM-4AD6R 36.3
GTEX-144GM-0926-SM-5O994 35.3
GTEX-11P82-1326-SM-5HL62 35.0
GTEX-11DZ1-0326-SM-5N9BN 34.9
GTEX-ZV7C-1826-SM-5NQ83 34.6
GTEX-ZYWO-2326-SM-5GZY4 33.0
GTEX-13O61-1826-SM-5KM4I 32.4
GTEX-T5JW-2026-SM-4DM63 32.3
GTEX-X261-0626-SM-3NMD9 32.2
GTEX-R55D-0826-SM-48FEA 31.1
GTEX-WOFL-0826-SM-3MJG1 31.1
GTEX-13FTW-1426-SM-5LZWZ 31.0
GTEX-Y3I4-1526-SM-4TT7K 30.7
GTEX-1211K-1926-SM-5EQLB 30.6
GTEX-ZDYS-1126-SM-5K7UB 30.2
GTEX-YFCO-1826-SM-4W1YH 29.7
GTEX-WY7C-2726-SM-3NB3P 29.5
GTEX-13W3W-1226-SM-5LU4H 29.0
GTEX-XGQ4-0926-SM-4AT4U 29.0
GTEX-13N1W-0626-SM-5MR4U 28.7
GTEX-1117F-2826-SM-5GZXL 28.3
GTEX-Y9LG-1426-SM-5IFJZ 27.9
GTEX-145LT-0726-SM-5S2VM 27.8
GTEX-139T6-1626-SM-5PNYZ 27.6
GTEX-ZZ64-1226-SM-5E43R 27.4
GTEX-XV7Q-2326-SM-4BRVZ 26.9
GTEX-YEC3-1026-SM-5IFI5 26.5
GTEX-117YX-1426-SM-5H12H 26.3
GTEX-Y114-2026-SM-4TT7L 26.3
GTEX-ZDTT-2126-SM-5S2OJ 26.3
GTEX-11I78-2226-SM-5PNYA 26.2
GTEX-S33H-0326-SM-4AD6N 25.8
GTEX-133LE-1726-SM-5K7VQ 25.3
GTEX-14AS3-1626-SM-5S2OY 24.9
GTEX-1399U-1826-SM-5PNZ1 24.8
GTEX-146FH-0826-SM-5SI8T 24.5
GTEX-TKQ2-1826-SM-33HB2 24.5
GTEX-ZTX8-1226-SM-4YCE9 24.0
GTEX-QEL4-2126-SM-447AE 23.9
GTEX-ZLV1-1426-SM-4WWES 23.9
GTEX-13D11-1026-SM-5IJFB 23.6
GTEX-T6MO-0326-SM-32QOK 23.6
GTEX-XUZC-1626-SM-4BRVP 23.3
GTEX-ZV6S-1826-SM-5NQ8D 23.3
GTEX-VUSG-2226-SM-4KKZO 23.2
GTEX-11NSD-0926-SM-5N9DR 22.9
GTEX-14ABY-2126-SM-5QGQZ 22.9
GTEX-Y8E4-1626-SM-5S2MW 22.7
GTEX-1122O-1226-SM-5H113 22.6
GTEX-145MN-1926-SM-5SIAI 22.6
GTEX-11EM3-1326-SM-5N9C6 22.3
GTEX-XBED-1626-SM-47JYN 22.3
GTEX-ZPIC-1126-SM-5BC7F 22.2
GTEX-WFON-1826-SM-3GILG 21.9
GTEX-ZVT2-1826-SM-5NQ8W 21.8
GTEX-11LCK-2426-SM-5HL5F 21.6
GTEX-XUW1-2326-SM-4BOO5 21.4
GTEX-12BJ1-1826-SM-5HL9N 21.1
GTEX-ZYW4-0826-SM-5GIDG 20.7
GTEX-13113-1726-SM-5GCOO 20.5
GTEX-139TU-0626-SM-5KM3X 20.5
GTEX-WXYG-2226-SM-4E3IM 20.1
GTEX-QEG5-0726-SM-4R1JQ 20.0
GTEX-SIU7-1626-SM-4BRUK 20.0
GTEX-13FHO-0826-SM-5L3E8 19.6
GTEX-T6MN-0726-SM-32PML 19.6
GTEX-UJHI-1426-SM-3DB9C 19.6
GTEX-PSDG-1626-SM-48TCQ 19.5
GTEX-S4UY-0726-SM-4AD6X 19.5
GTEX-ZQG8-0726-SM-5P9H9 19.5
GTEX-XOT4-0726-SM-4GIAW 19.2
GTEX-UTHO-1026-SM-3GAF7 19.0
GTEX-13O3Q-2226-SM-5KM4O 18.7
GTEX-ZVZQ-0826-SM-51MRF 18.7
GTEX-YJ8O-2226-SM-5IFHW 18.6
GTEX-12WSK-2226-SM-5GCO5 18.5
GTEX-YB5E-1726-SM-5IFJ3 18.5
GTEX-U412-1826-SM-4DXTJ 18.4
GTEX-Y5LM-1726-SM-4VDSX 18.4
GTEX-XQ8I-2426-SM-4WAXY 18.2
GTEX-YB5K-1626-SM-5IFIN 18.0
GTEX-ZQUD-1926-SM-51MSA 17.9
GTEX-12WSM-1726-SM-5BC6J 17.8
GTEX-132NY-0826-SM-5K7Y7 17.8
GTEX-WI4N-1426-SM-3LK7H 17.8
GTEX-Y8LW-1626-SM-5IFHX 17.8
GTEX-111YS-1926-SM-5GICC 17.7
GTEX-11O72-2126-SM-5N9FO 17.7
GTEX-QMRM-1626-SM-4R1KV 17.6
GTEX-XQ3S-1326-SM-4BOPQ 17.6
GTEX-13NZ9-1026-SM-5MR5K 17.5
GTEX-13N11-1726-SM-5J1OJ 17.3
GTEX-UPK5-2326-SM-3P5Z8 17.3
GTEX-11P81-1926-SM-5BC53 17.2
GTEX-1192X-2326-SM-5987X 17.1
GTEX-145ME-1526-SM-5Q5F2 17.0
GTEX-TML8-1226-SM-32QON 17.0
GTEX-11ONC-2126-SM-5HL6E 16.9
GTEX-11GSO-1926-SM-5A5K3 16.7
GTEX-13OW8-0226-SM-5K7UP 16.4
GTEX-ZF29-1926-SM-5S2P1 16.4
GTEX-ZVT4-1026-SM-57WC4 16.4
GTEX-12WSB-0626-SM-59HJO 16.2
GTEX-ZU9S-1926-SM-5NQBP 16.2
GTEX-S341-1526-SM-4AD6K 16.0
GTEX-13OW5-2226-SM-5L3HC 15.9
GTEX-13FTX-1126-SM-5N9EN 15.8
GTEX-ZAB4-2526-SM-5HL8M 15.6
GTEX-WYJK-1326-SM-3NB2T 15.5
GTEX-ZWKS-2826-SM-5NQ74 15.4
GTEX-ZEX8-2226-SM-57WC6 15.2
GTEX-13O3P-0826-SM-5L3DH 15.1
GTEX-XUJ4-1926-SM-4BOOV 15.1
GTEX-11P7K-0726-SM-5EGKX 15.0
GTEX-S4P3-1326-SM-4AD6V 14.9
GTEX-X4EP-2926-SM-3P5YQ 14.9
GTEX-145MO-0826-SM-5NQBL 14.8
GTEX-TMMY-0726-SM-33HBE 14.8
GTEX-11GS4-2126-SM-5A5KR 14.6
GTEX-1269C-2426-SM-5FQSN 14.6
GTEX-13CF2-2026-SM-5K7VI 14.6
GTEX-11WQC-1726-SM-5GU4W 14.5
GTEX-1314G-1226-SM-5BC6D 14.5
GTEX-ZZPU-0626-SM-5E43T 14.4
GTEX-Y3IK-2326-SM-4WWDT 14.3
GTEX-U3ZH-1426-SM-4DXSR 14.1
GTEX-WRHU-0326-SM-3MJFY 14.1
GTEX-QDT8-0626-SM-48TYW 13.6
GTEX-13QIC-2326-SM-5LU5N 13.5
GTEX-X15G-1626-SM-3NMB3 13.5
GTEX-117XS-1926-SM-5GICO 13.2
GTEX-ZXES-0826-SM-5E43C 13.2
GTEX-11DXW-0626-SM-5N9ER 13.0
GTEX-11NV4-2026-SM-5N9DG 13.0
GTEX-RWS6-1926-SM-47JXY 13.0
GTEX-ZUA1-1526-SM-59HLS 13.0
GTEX-Y111-2026-SM-4SOJA 12.9
GTEX-ZYFC-0826-SM-5E44K 12.8
GTEX-11PRG-0826-SM-5EQ6A 12.7
GTEX-11DXY-2326-SM-5GICW 12.5
GTEX-1313W-0826-SM-5EQ4T 12.5
GTEX-WYBS-0926-SM-3NM94 12.5
GTEX-ZF3C-2326-SM-5S2MZ 12.5
GTEX-R53T-1526-SM-48FEK 12.4
GTEX-ZC5H-2626-SM-5J2MG 12.4
GTEX-11ZUS-0826-SM-5FQUY 12.2
GTEX-144GL-2026-SM-5LU3O 12.2
GTEX-13NZB-2126-SM-5MR4Y 12.0
GTEX-Y5V5-2126-SM-4WWFO 12.0
GTEX-ZDXO-0126-SM-5S2ND 11.9
GTEX-147F4-2826-SM-5NQBN 11.8
GTEX-12ZZX-1126-SM-5EGKB 11.6
GTEX-U3ZN-1926-SM-4DXSG 11.4
GTEX-VJWN-0726-SM-3GIJ8 11.3
GTEX-11EI6-0626-SM-5985T 11.1
GTEX-QVJO-1826-SM-447C9 10.9
GTEX-ZAJG-0626-SM-5HL8X 10.9
GTEX-ZVE2-1226-SM-5NQ8R 10.9
GTEX-11OF3-1926-SM-59889 10.8
GTEX-12KS4-0126-SM-5Q5A5 10.8
GTEX-T5JC-2126-SM-32PMO 10.8
GTEX-11EMC-2026-SM-5A5JV 10.7
GTEX-Q2AG-0326-SM-48U1O 10.7
GTEX-XMK1-1126-SM-4IHJ8 10.5
GTEX-ZVTK-0326-SM-51MRR 10.4
GTEX-131XW-0726-SM-5EGK3 10.2
GTEX-XMD1-0826-SM-4AT52 10.2
GTEX-139T8-0826-SM-5L3DE 10.1
GTEX-ZYT6-0126-SM-5E45J 9.9
GTEX-14753-2426-SM-5LU8U 9.6
GTEX-132Q8-1426-SM-5EGK7 9.5
GTEX-11DXZ-1926-SM-5GZZL 9.4
GTEX-S7SE-0826-SM-4AT4D 9.2
GTEX-WYVS-1726-SM-3NMAY 9.1
GTEX-131YS-0626-SM-5EGKL 9.0
GTEX-13NZ8-0126-SM-5IJCT 8.8
GTEX-RU72-0626-SM-46MUI 8.4
GTEX-13FTY-2226-SM-5J1ND 8.3
GTEX-13W46-0826-SM-5LU3H 8.2
GTEX-R3RS-0626-SM-48FE1 7.9
GTEX-ZF2S-2026-SM-5E461 7.9
GTEX-YFC4-1426-SM-5IFJG 7.8
GTEX-W5X1-2326-SM-3GIL6 7.4
GTEX-13PL6-2926-SM-5L3I2 7.3
GTEX-R55F-1726-SM-2TF4R 7.1
GTEX-T2YK-2226-SM-32QPT 7.0
GTEX-XMD2-0926-SM-4WWEF 7.0
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

99.1

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 99.1
FF:10080-102A8 77 years, female 99.1

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