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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:57.9TPM
GTEx:63.2RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Medium
 

Antibody staining

Antibody HPA023617

 

Antibody HPA050655

 

Endothelial cells

Low   Low  

Glial cells

Not detected   Not detected  

Neuronal cells

Not detected   Not detected  

Neuropil

Medium   Medium  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

57.9

N/A Male, age 5
Sample 1
TPM: 110.0
overview Female, age 40
Sample 2
TPM: 43.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 20.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

63.2

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 69.7
Samples: 114

Max RPKM: 146.7
Min RPKM: 17.9
Std RPKM: 23
Median RPKM: 65.2
GTEX-13OVJ-2826-SM-5L3GW 146.7
GTEX-1117F-3226-SM-5N9CT 132.8
GTEX-1445S-3026-SM-5O9BR 127.9
GTEX-11GSP-3226-SM-5986O 121.1
GTEX-ZE7O-3126-SM-5HL5X 119.1
GTEX-13JVG-3126-SM-5L3FH 109.4
GTEX-12WSD-3126-SM-5HL7P 107.4
GTEX-13OW7-3026-SM-5L3GY 107.4
GTEX-11EMC-3226-SM-5EGKW 106.7
GTEX-131XW-3126-SM-5LZUC 104.9
GTEX-11TTK-2926-SM-5PNYP 101.9
GTEX-ZVT3-3026-SM-5E43N 100.8
GTEX-13S7M-3126-SM-5RQJQ 99.7
GTEX-12ZZW-2926-SM-5LZUP 98.4
GTEX-139T8-1026-SM-5J2MC 93.2
GTEX-QDT8-2926-SM-32PKC 91.0
GTEX-XLM4-3026-SM-4AT6L 90.8
GTEX-13FHO-3026-SM-5J1O9 90.2
GTEX-1192X-3126-SM-5N9BY 89.1
GTEX-145MG-3026-SM-5RQJA 88.6
GTEX-13QIC-2926-SM-5J2NF 87.9
GTEX-1399T-3026-SM-5KLZC 86.7
GTEX-11ONC-2926-SM-5P9JM 85.6
GTEX-13NYB-3026-SM-5IJD7 85.3
GTEX-13OW8-2826-SM-5L3GC 85.2
GTEX-RU72-3026-SM-5SI7Y 84.9
GTEX-13JUV-2926-SM-5LZX7 84.4
GTEX-11GS4-3126-SM-5A5LH 83.9
GTEX-11GSO-2926-SM-5HL73 83.0
GTEX-QVUS-2826-SM-3GADB 82.8
GTEX-13X6K-2926-SM-5Q5D5 82.2
GTEX-12ZZX-2926-SM-5GCOQ 81.2
GTEX-13G51-3026-SM-5IJB8 80.7
GTEX-13OW6-3026-SM-5J2MI 80.1
GTEX-14A5I-2926-SM-5Q5CQ 80.1
GTEX-12ZZY-3026-SM-5GCOU 79.8
GTEX-145MF-2726-SM-5O995 78.6
GTEX-11EI6-3026-SM-5GZZO 77.9
GTEX-11OC5-0726-SM-5P9JK 77.9
GTEX-11DXW-1126-SM-5H12Q 77.0
GTEX-144GL-3026-SM-5Q5CW 76.5
GTEX-14BMV-3026-SM-5S2PQ 75.2
GTEX-14ASI-3026-SM-5S2PN 75.1
GTEX-YJ89-3026-SM-5IFJI 75.1
GTEX-11NUK-2926-SM-5A5MD 74.9
GTEX-Y111-2726-SM-4TT3N 74.8
GTEX-13PL6-3126-SM-5LUAR 73.7
GTEX-147GR-3026-SM-5S2ML 73.4
GTEX-Q2AG-2926-SM-2HMJ3 73.3
GTEX-12ZZZ-3026-SM-5BC67 71.9
GTEX-13FHP-3026-SM-5IJBS 71.7
GTEX-13O3O-3126-SM-5KM3H 70.9
GTEX-13PVQ-3026-SM-5SI93 67.8
GTEX-QMR6-1426-SM-32PLA 66.2
GTEX-13O3Q-2926-SM-5KM45 66.1
GTEX-ZAK1-3026-SM-5S2MJ 65.8
GTEX-13FLW-1426-SM-5K7YE 65.7
GTEX-11WQK-3026-SM-5EQL6 64.8
GTEX-13OVH-3026-SM-5MR4N 64.8
GTEX-PWO3-0926-SM-2I5EY 64.8
GTEX-XOTO-3026-SM-4B65M 64.8
GTEX-WHSE-3026-SM-3P5ZH 64.5
GTEX-1128S-2726-SM-5H12C 64.3
GTEX-OXRN-2426-SM-2I5EQ 64.2
GTEX-YFC4-3126-SM-5PNV6 64.2
GTEX-145LS-3126-SM-5Q5BY 63.3
GTEX-T5JC-2426-SM-3NMDB 63.2
GTEX-13FXS-3126-SM-5J2NN 62.5
GTEX-Y8DK-0826-SM-4TT3T 62.5
GTEX-111FC-3126-SM-5GZZ2 61.6
GTEX-12WSA-2926-SM-5EQ4D 61.5
GTEX-13X6J-3026-SM-5Q5CU 61.5
GTEX-12126-1026-SM-5P9JJ 61.3
GTEX-R55F-1326-SM-5S2V4 61.1
GTEX-13SLX-3126-SM-5S2Q5 60.7
GTEX-ZYFD-3026-SM-5E44C 58.3
GTEX-WZTO-2926-SM-3NM9I 58.1
GTEX-QVJO-1426-SM-2S1QY 57.7
GTEX-11PRG-2926-SM-5987A 57.3
GTEX-ZUA1-3026-SM-59HJC 57.1
GTEX-11DXY-3226-SM-5GIDE 56.9
GTEX-131YS-3126-SM-5KLYT 56.5
GTEX-NPJ7-2726-SM-2I3FT 55.5
GTEX-ZZPT-3026-SM-5GZXH 55.1
GTEX-N7MT-1126-SM-5SI7V 54.3
GTEX-13IVO-2926-SM-5L3CZ 53.6
GTEX-12WSC-3026-SM-5GCNF 53.4
GTEX-T6MN-2626-SM-32PMQ 52.8
GTEX-RNOR-2326-SM-2TF4I 52.1
GTEX-144FL-3026-SM-5O99C 51.6
GTEX-132Q8-3026-SM-5PNVG 50.0
GTEX-13NYC-2826-SM-5K7WR 50.0
GTEX-1313W-3126-SM-5LZUI 49.8
GTEX-13VXU-2926-SM-5LU5C 49.7
GTEX-12WSH-3026-SM-5CVNI 49.4
GTEX-117XS-3026-SM-5N9CA 49.2
GTEX-TSE9-3026-SM-3DB76 48.8
GTEX-WVLH-3026-SM-3MJG9 48.6
GTEX-145MH-3026-SM-5Q5DZ 46.2
GTEX-11O72-2926-SM-5BC4V 45.6
GTEX-WWYW-3126-SM-3NB39 45.6
GTEX-11NV4-2126-SM-5N9DS 45.5
GTEX-NPJ8-1526-SM-2D7VU 43.9
GTEX-ZAJG-3126-SM-5HL9J 41.9
GTEX-X4XX-3026-SM-3NMB2 40.1
GTEX-X585-3026-SM-46MWF 39.9
GTEX-T2IS-3026-SM-32QPM 39.0
GTEX-13NYS-3126-SM-5KLYV 38.7
GTEX-11ZUS-2926-SM-5FQSL 38.2
GTEX-Z93S-2926-SM-57WB9 33.0
GTEX-WL46-2926-SM-3LK82 32.8
GTEX-PVOW-2526-SM-2XCF7 26.8
GTEX-UTHO-3026-SM-3GAFB 23.1
GTEX-11OF3-2926-SM-5HL78 17.9
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 56.2
Samples: 108

Max RPKM: 144.4
Min RPKM: 18.2
Std RPKM: 24.8
Median RPKM: 50
GTEX-13OVJ-0011-R10b-SM-5L3HT 144.4
GTEX-1445S-0011-R10a-SM-5PNWB 128.5
GTEX-13JVG-0011-R10b-SM-5KM2P 116.7
GTEX-ZV68-0011-R10a-SM-51MT7 115.5
GTEX-11GSP-0011-R10a-SM-5NQ7J 110.8
GTEX-1477Z-0011-R10b-SM-5S2RF 110.8
GTEX-12WSD-0011-R10b-SM-5GU79 109.4
GTEX-131XW-0011-R10a-SM-5DUVA 103.7
GTEX-13JUV-0011-R10b-SM-5LZXR 96.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 93.7
GTEX-11WQC-0011-R10a-SM-57WCT 93.2
GTEX-14753-0011-R10b-SM-5S2WE 92.7
GTEX-13SLW-0011-R10a-SM-5S2UI 92.5
GTEX-13OW8-0011-R10a-SM-5L3H6 84.8
GTEX-147F4-0011-R10b-SM-5S2WC 81.9
GTEX-139TS-0011-R10a-SM-5K7TU 80.9
GTEX-11H98-0011-R10b-SM-5NQ98 79.3
GTEX-13FHO-0011-R10b-SM-5J2MM 78.5
GTEX-13O3O-0011-R10a-SM-5LUA9 75.8
GTEX-13OW6-0011-R10a-SM-5L3HE 74.5
GTEX-14BIL-0011-R10a-SM-5SI75 73.4
GTEX-145LU-0011-R10a-SM-5PNWJ 73.2
GTEX-ZAB4-0011-R10a-SM-4SOKH 73.2
GTEX-13OVL-0011-R10a-SM-5L3GS 73.0
GTEX-13FXS-0011-R10a-SM-5J2MA 71.2
GTEX-XLM4-0011-R10A-SM-4AT5P 70.6
GTEX-TSE9-0011-R10A-SM-3DB7O 69.3
GTEX-12ZZW-0011-R10b-SM-5HL9X 67.8
GTEX-13X6K-0011-R10a-SM-5P9JR 67.1
GTEX-12WSA-0011-R10b-SM-5P9ET 66.0
GTEX-147GR-0011-R10b-SM-5S2UM 65.6
GTEX-ZDXO-0011-R10a-SM-4WWD8 65.2
GTEX-13OW7-0011-R10a-SM-5L3H3 62.5
GTEX-ZVT3-0011-R10b-SM-57WB6 62.4
GTEX-14ASI-0011-R10b-SM-5S2VZ 62.1
GTEX-RVPU-0011-R10A-SM-2XCAH 60.1
GTEX-13CZV-0011-R10b-SM-5LZYD 59.3
GTEX-12ZZY-0011-R10b-SM-5HL7W 58.4
GTEX-11WQK-0011-R10a-SM-5BC6R 57.9
GTEX-ZUA1-0011-R10a-SM-51MT6 57.9
GTEX-12WSM-0011-R10a-SM-5DUWV 57.5
GTEX-12126-0011-R10b-SM-5BC6T 57.3
GTEX-P44H-0011-R10A-SM-2XCEK 56.5
GTEX-13FTZ-0011-R10b-SM-5KLZS 56.4
GTEX-12ZZX-0011-R10b-SM-5DUWK 55.4
GTEX-145MG-0011-R10a-SM-5PNWG 53.6
GTEX-T5JC-0011-R10A-SM-32PM2 53.5
GTEX-ZVZQ-0011-R10b-SM-51MRT 53.1
GTEX-13N1W-0011-R10b-SM-5MR4H 53.0
GTEX-YFC4-0011-R10a-SM-4SOK5 51.3
GTEX-13S7M-0011-R10b-SM-5PNZB 51.1
GTEX-QDT8-0011-R10A-SM-32PKG 50.8
GTEX-13NYB-0011-R10a-SM-5KM43 50.6
GTEX-QMR6-0011-R10A-SM-32PKO 50.3
GTEX-131XH-0011-R10a-SM-5EGLJ 49.6
GTEX-13NZA-0011-R10b-SM-5KM54 49.4
GTEX-12WSH-0011-R10a-SM-5LZUS 49.2
GTEX-YJ89-0011-R10a-SM-4SOK9 48.6
GTEX-NL4W-0011-R10A-SM-2I3DY 48.2
GTEX-X261-0011-R10B-SM-4E3JT 47.7
GTEX-13QJC-0011-R10a-SM-5SI63 47.2
GTEX-12WSF-0011-R10a-SM-5LZVH 46.4
GTEX-13QIC-0011-R10a-SM-5O9C7 46.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC 45.5
GTEX-ZXG5-0011-R10a-SM-57WDD 45.1
GTEX-13RTJ-0011-R10b-SM-5O9CW 44.9
GTEX-OXRN-0011-R10A-SM-2I5GC 44.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 44.4
GTEX-OXRO-0011-R10A-SM-2I5EH 44.0
GTEX-13NYS-0011-R10a-SM-5MR4S 43.8
GTEX-13FLW-0011-R10b-SM-5LZZF 43.7
GTEX-14BIN-0011-R10a-SM-5S2UA 43.6
GTEX-NPJ8-0011-R10A-SM-2YUMO 43.6
GTEX-N7MT-0011-R10A-SM-2I3E1 43.5
GTEX-13SLX-0011-R10a-SM-5P9HV 42.9
GTEX-13G51-0011-R10b-SM-5LZYF 42.4
GTEX-132Q8-0011-R10b-SM-5DUWZ 42.1
GTEX-ZF28-0011-R10a-SM-4WWEH 40.8
GTEX-13O3Q-0011-R10b-SM-5KM39 40.6
GTEX-Q2AG-0011-R10A-SM-2HMLA 40.2
GTEX-13N2G-0011-R10a-SM-5MR34 39.4
GTEX-Z93S-0011-R10a-SM-4RGNM 39.0
GTEX-NPJ7-0011-R10A-SM-2I3E5 38.4
GTEX-X4EP-0011-R10B-SM-4QASJ 38.3
GTEX-145LS-0011-R10a-SM-5PNUQ 37.5
GTEX-QVUS-0011-R10A-SM-3GIK3 37.5
GTEX-Y8DK-0011-R10A-SM-4SOK1 37.3
GTEX-S7SE-0011-R10A-SM-2XCDF 36.7
GTEX-WZTO-0011-R10B-SM-4E3KB 35.7
GTEX-XMD1-0011-R10A-SM-4AT4A 35.0
GTEX-12WSE-0011-R10b-SM-5P9JV 33.6
GTEX-WWYW-0011-R10A-SM-3NB35 33.3
GTEX-13X6J-0011-R10b-SM-5PNWA 33.1
GTEX-13X6I-0011-R10a-SM-5PNWI 33.0
GTEX-131YS-0011-R10b-SM-5EQ5N 32.2
GTEX-13IVO-0011-R10a-SM-5LZY3 31.5
GTEX-X4XX-0011-R10B-SM-46MWO 31.1
GTEX-WVLH-0011-R10A-SM-3MJFM 29.9
GTEX-1313W-0011-R10b-SM-5DUXA 28.7
GTEX-N7MS-0011-R10A-SM-2HMJK 28.0
GTEX-T6MN-0011-R10A-SM-32QP7 27.9
GTEX-12WSC-0011-R10a-SM-5GU57 27.1
GTEX-QVJO-0011-R10A-SM-2S1QJ 27.1
GTEX-145MH-0011-R10b-SM-5PNUK 24.8
GTEX-X585-0011-R10A-SM-46MUY 21.9
GTEX-WL46-0011-R10A-SM-3MJFQ 18.9
GTEX-11ZUS-0011-R10b-SM-5BC79 18.7
GTEX-NL3H-0011-R10A-SM-2I3E9 18.2
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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