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Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:22.5TPM
GTEx:12.4RPKM
FANTOM5:15.2Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody HPA055257

 

Antibody HPA062675

 

Glandular cells

Not detected   Low  
   
   
   

PROSTATE - HPA RNA-seq

Average TPM

22.5

overview Male, age 62
Sample 1
TPM: 21.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 26.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 34.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 34.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 17.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 26.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 20.1
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 22.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 15.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

12.4

GTEx sample id

RPKM

 

Prostate

Prostate
RPKM: 12.4
Samples: 106

Max RPKM: 23.2
Min RPKM: 4.8
Std RPKM: 3.4
Median RPKM: 12.4
GTEX-WZTO-0926-SM-4PQZ3 23.2
GTEX-132NY-2826-SM-5P9G2 21.8
GTEX-SNMC-0926-SM-4DM5U 20.0
GTEX-13FXS-2826-SM-5LZYC 18.9
GTEX-XQ3S-2526-SM-4BOOG 18.6
GTEX-QEG4-2226-SM-4R1JM 18.0
GTEX-YF7O-1926-SM-4W1YQ 17.8
GTEX-NPJ8-2426-SM-3MJHL 17.7
GTEX-XOTO-2826-SM-4B65I 17.7
GTEX-OIZH-2026-SM-3NB1M 17.5
GTEX-XMK1-1026-SM-4B65H 17.4
GTEX-X5EB-1826-SM-4E3K8 16.5
GTEX-13FTW-1226-SM-5LZZ1 16.2
GTEX-V1D1-1926-SM-4JBGX 16.2
GTEX-ZUA1-2826-SM-59HLE 16.0
GTEX-111FC-2026-SM-5GZYO 15.6
GTEX-14BMV-2326-SM-5RQJ4 15.3
GTEX-14E6E-1126-SM-5S2R4 15.1
GTEX-SJXC-2026-SM-4DM6N 15.1
GTEX-XPVG-2026-SM-4B65E 14.8
GTEX-146FQ-1726-SM-5QGPX 14.7
GTEX-WK11-2626-SM-4OOSK 14.7
GTEX-S33H-1826-SM-4AD65 14.6
GTEX-S95S-1026-SM-4B64M 14.6
GTEX-ZTX8-1026-SM-5EGHD 14.5
GTEX-RWSA-2026-SM-47JX8 14.4
GTEX-WFG8-1826-SM-4LVM4 14.4
GTEX-12ZZZ-2026-SM-5LZWJ 14.3
GTEX-ZY6K-1526-SM-5GZXE 14.3
GTEX-UTHO-2726-SM-4JBH9 14.1
GTEX-QV44-1526-SM-4R1KI 14.0
GTEX-13OW8-0426-SM-5J2NR 13.9
GTEX-11OF3-1726-SM-5GU5Q 13.8
GTEX-V955-1826-SM-4JBIL 13.7
GTEX-13O21-1126-SM-5N9EV 13.6
GTEX-Q2AI-1126-SM-48U19 13.6
GTEX-11WQK-2726-SM-5EQMU 13.5
GTEX-13N2G-1826-SM-5KM1I 13.5
GTEX-145LT-0626-SM-5O99E 13.4
GTEX-11TT1-2026-SM-5EQM8 13.2
GTEX-NFK9-2226-SM-3MJGP 13.2
GTEX-11TUW-2126-SM-5GU7B 13.0
GTEX-11NSD-0826-SM-5986S 12.8
GTEX-WH7G-1726-SM-4LVKY 12.8
GTEX-Y8E4-2126-SM-5RQHO 12.8
GTEX-WFON-1626-SM-4LVMV 12.7
GTEX-11P82-1126-SM-5BC5K 12.6
GTEX-145LV-1226-SM-5S2QH 12.6
GTEX-11DYG-2526-SM-5N9BB 12.5
GTEX-1399T-1226-SM-5P9J5 12.5
GTEX-SNOS-1026-SM-4DM4Y 12.5
GTEX-U412-2026-SM-4DXSI 12.5
GTEX-PLZ6-1126-SM-3P5ZR 12.4
GTEX-QV31-1026-SM-4R1K3 12.4
GTEX-13G51-2326-SM-5LZXV 12.3
GTEX-1399R-0526-SM-5IJEF 12.2
GTEX-U3ZM-0926-SM-4DXSW 12.2
GTEX-REY6-2126-SM-48FD9 12.1
GTEX-111CU-1526-SM-5N9FS 12.0
GTEX-12C56-1326-SM-5FQSV 11.9
GTEX-139T6-1526-SM-5P9G6 11.8
GTEX-S4Q7-1026-SM-4AD75 11.6
GTEX-11O72-2726-SM-5HL6K 11.5
GTEX-QLQ7-1326-SM-4R1JY 11.5
GTEX-117YW-1426-SM-5EGGO 11.3
GTEX-ZTTD-2726-SM-57WFA 11.3
GTEX-13O61-1726-SM-5KM46 11.2
GTEX-T8EM-1826-SM-4DM7F 11.2
GTEX-ZPU1-2026-SM-57WFI 11.1
GTEX-11ZUS-2126-SM-5N9E6 10.9
GTEX-14ABY-0726-SM-5Q5DF 10.9
GTEX-U4B1-1426-SM-4DXTX 10.9
GTEX-WOFM-0326-SM-4OOSL 10.9
GTEX-13FHO-2826-SM-5K7ZA 10.7
GTEX-XGQ4-1826-SM-4AT6F 10.6
GTEX-117YX-1526-SM-5H12T 10.5
GTEX-ZDYS-1226-SM-5IJF3 10.5
GTEX-QMRM-1426-SM-4R1K8 10.4
GTEX-XAJ8-0626-SM-47JY4 10.4
GTEX-ZZ64-0926-SM-5E44L 10.3
GTEX-RM2N-1126-SM-48FCY 10.2
GTEX-YB5E-1826-SM-5IFI4 10.1
GTEX-11P7K-0626-SM-5985Z 10.0
GTEX-ZLFU-1726-SM-4WWBU 9.8
GTEX-13NYS-1026-SM-5KLZT 9.7
GTEX-132QS-1126-SM-5P9GC 9.6
GTEX-OOBJ-2026-SM-3NB1R 9.4
GTEX-VJYA-1226-SM-3GIJ6 9.2
GTEX-ZVP2-0826-SM-59HJ6 9.1
GTEX-ZT9W-1626-SM-4YCDQ 8.8
GTEX-Y9LG-1826-SM-4VBQC 8.7
GTEX-11EQ9-1726-SM-5HL6U 8.4
GTEX-WFG7-1826-SM-3GIL1 8.4
GTEX-13RTJ-2126-SM-5S2PZ 8.3
GTEX-111YS-1726-SM-5GIED 7.9
GTEX-OOBK-2025-SM-3LK5S 7.7
GTEX-U8XE-2526-SM-4E3IT 7.7
GTEX-14C5O-2826-SM-5RQI6 7.4
GTEX-12696-2226-SM-5EQ65 7.3
GTEX-144GM-0826-SM-5O98R 7.1
GTEX-12BJ1-1226-SM-5LUAE 6.7
GTEX-YJ8A-1126-SM-5IFJU 6.7
GTEX-S3XE-1326-SM-4AD4H 6.3
GTEX-13111-1326-SM-5GCNO 5.8
GTEX-131XF-1926-SM-5DUW4 5.8
GTEX-148VJ-1826-SM-5Q5DV 4.8
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

15.2

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 15.2
FF:10022-101D4 73,79,93 years, male 15.2

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