Fields »
ABOUT
HELP
BLOG
GLOD4

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:47.4TPM
GTEx:16.9RPKM
FANTOM5:44.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Not available
Fibroblasts:Medium
Peripheral nerve:Not available
 
 

Antibody staining

Antibody HPA021623

  

Antibody HPA023246

  

Antibody HPA023248

  

Adipocytes

 Low   Low   Not detected  

Chondrocytes

 Medium  

Fibroblasts

 Low   Medium   Low  

Peripheral nerve

 Low   Low  
        
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Low
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA021623

  

Antibody HPA023246

  

Antibody HPA023248

  

Adipocytes

 Low   Not detected   Not detected  

Fibroblasts

 Medium   Low   Not detected  

Peripheral nerve

 Low   Not detected   Not detected  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

47.4
N/A Female, age 80
Sample 1
TPM: 69.0
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 50.7
N/A Female, age 57
Sample 3
TPM: 43.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 48.0
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 25.8
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

16.9

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 18.2
Samples: 350

Max RPKM: 32.6
Min RPKM: 9.6
Std RPKM: 3
Median RPKM: 18
GTEX-13JVG-0226-SM-5J1MW 32.6
GTEX-13FHP-0226-SM-5K7WD 30.6
GTEX-1399T-2726-SM-5K7XK 25.4
GTEX-ZYFC-0326-SM-5NQ7H 24.8
GTEX-147GR-0426-SM-5S2OL 24.7
GTEX-YJ8O-2426-SM-5HL7S 24.2
GTEX-POMQ-2326-SM-5S2VS 23.8
GTEX-14BMV-0226-SM-5S2N2 23.7
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 15.0
Samples: 227

Max RPKM: 25.9
Min RPKM: 6.7
Std RPKM: 3.5
Median RPKM: 14.8
GTEX-11DXY-0326-SM-5H12F 25.9
GTEX-14A6H-1026-SM-5SIAZ 24.3
GTEX-1399T-1326-SM-5PNVH 23.0
GTEX-13NZ9-2026-SM-5KM1U 22.4
GTEX-11NV4-1426-SM-5BC4W 22.3
GTEX-13G51-0526-SM-5IJCQ 21.7
GTEX-11PRG-1526-SM-5HL6Z 21.6
GTEX-11NUK-2026-SM-5PNVZ 21.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

44.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 44.9
FF:10010-101C1 65,65,76 years, mixed 44.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.