Tissue expression of ABCA3 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	7.4	TPM
GTEx:	4.6	RPKM
FANTOM5:	14.5	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Chondrocytes:	Medium
Fibroblasts:	Low
Peripheral nerve:	Medium

Antibody staining	Antibody HPA007884
Adipocytes	Low
Chondrocytes	Medium
Fibroblasts	Low
Peripheral nerve	Medium

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Peripheral nerve:	Medium

Antibody staining	Antibody HPA007884
Adipocytes	Medium
Peripheral nerve	Medium

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	7.4

Female, age 80

Sample 1
TPM: 10.0

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 8.1

Female, age 57

Sample 3
TPM: 7.5

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 5.2

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 6.2

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	4.6

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 4.9

Samples: 350

Max RPKM: 15.6
Min RPKM: 0.8
Std RPKM: 1.5
Median RPKM: 4.7

GTEX-YB5E-2126-SM-5IFI7

15.6

GTEX-P4PP-0226-SM-5S2VR

12.1

GTEX-ZQG8-1526-SM-5HL65

9.9

GTEX-XUJ4-2526-SM-4BOO4

9.0

GTEX-QEG5-0326-SM-2S1PB

8.4

GTEX-PWCY-1926-SM-3NB25

8.3

GTEX-S341-1626-SM-3K2B8

8.2

GTEX-U4B1-1726-SM-3DB9F

8.2

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 4.3

Samples: 227

Max RPKM: 7.7
Min RPKM: 1.3
Std RPKM: 1.3
Median RPKM: 4.2

GTEX-ZT9W-1026-SM-57WG5

7.7

GTEX-139YR-0326-SM-5J1MC

7.5

GTEX-ZZ64-0626-SM-5GZWR

7.5

GTEX-1122O-0926-SM-5N9C9

7.4

GTEX-1339X-0726-SM-5L3FF

7.1

GTEX-XMK1-0926-SM-4B66X

7.0

GTEX-ZYFC-1826-SM-5GZZA

7.0

GTEX-WHWD-0826-SM-3LK6R

6.9

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	14.5

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 14.5

FF:10010-101C1

65,65,76 years, mixed

14.5