Tissue expression of ABCA3 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	51.7	TPM
GTEx:	24.3	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Low
Glial cells:	Not detected
Neuronal cells:	High
Neuropil:	Not detected

Antibody staining	Antibody HPA007884
Endothelial cells	Low
Glial cells	Not detected
Neuronal cells	High
Neuropil	Not detected

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	51.7

Male, age 5

Sample 1
TPM: 51.6

Female, age 40

Sample 2
TPM: 49.6

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 53.9

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	24.3

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 26.5

Samples: 114

Max RPKM: 42
Min RPKM: 12.8
Std RPKM: 6.2
Median RPKM: 27.4

GTEX-X585-3026-SM-46MWF

42.0

GTEX-11OF3-2926-SM-5HL78

41.4

GTEX-13FXS-3126-SM-5J2NN

37.9

GTEX-T5JC-2426-SM-3NMDB

37.6

GTEX-13SLX-3126-SM-5S2Q5

37.2

GTEX-WL46-2926-SM-3LK82

37.1

GTEX-13OW8-2826-SM-5L3GC

36.2

GTEX-13VXU-2926-SM-5LU5C

34.7

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 22.0

Samples: 108

Max RPKM: 36.8
Min RPKM: 8.4
Std RPKM: 6.5
Median RPKM: 22.6

GTEX-X585-0011-R10A-SM-46MUY

36.8

GTEX-Q2AG-0011-R10A-SM-2HMLA

34.7

GTEX-12WSE-0011-R10b-SM-5P9JV

32.7

GTEX-13N1W-0011-R10b-SM-5MR4H

31.9

GTEX-T5JC-0011-R10A-SM-32PM2

31.3

GTEX-NL3H-0011-R10A-SM-2I3E9

30.8

GTEX-WL46-0011-R10A-SM-3MJFQ

30.5

GTEX-131XH-0011-R10a-SM-5EGLJ

30.3

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue