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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:40.3RPKM
FANTOM5:274.4Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:High
 

Antibody staining

Antibody HPA041411

 

Glial cells

Medium  

Neuronal cells

High  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

40.3

GTEx sample id

RPKM

31.640.250.011.170.70102030405060708090100
 
31.640.250.011.170.70102030405060708090100

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 40.3
Samples: 117

Max RPKM: 103.1
Min RPKM: 11.1
Std RPKM: 16
Median RPKM: 40.2
GTEX-X4XX-0011-R5A-SM-46MWN 103.1
GTEX-XMD1-0011-R5A-SM-4AT47 90.3
GTEX-X585-0011-R5A-SM-46MVI 84.5
GTEX-WL46-0011-R5A-SM-3LK6V 70.7
GTEX-UTHO-0011-R5A-SM-3GIJD 64.0
GTEX-13OW6-0011-R5a-SM-5O9BK 63.9
GTEX-WHSE-0011-R5A-SM-3P5ZO 63.5
GTEX-11GSP-0011-R5a-SM-57WBE 61.8
GTEX-WZTO-0011-R5B-SM-3NMC5 60.9
GTEX-R55E-0011-R5A-SM-2TC5N 59.7
GTEX-PVOW-0011-R5A-SM-32PL7 59.0
GTEX-145MH-0011-R5a-SM-5P9JT 58.7
GTEX-RVPV-0011-R5A-SM-2TF69 58.7
GTEX-13SLX-0011-R5a-SM-5O9BV 57.8
GTEX-13FXS-0011-R5b-SM-5LZYE 56.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 55.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 55.2
GTEX-13X6I-0011-R5a-SM-5PNWW 55.1
GTEX-N7MS-0011-R5a-SM-2HMK8 54.6
GTEX-N7MT-0011-R5a-SM-2I3G6 54.4
GTEX-13G51-0011-R5a-SM-5L3EB 54.1
GTEX-13S7M-0011-R5b-SM-5P9HS 53.7
GTEX-WVLH-0011-R5A-SM-3MJFW 53.6
GTEX-QVJO-0011-R5A-SM-2S1QM 53.2
GTEX-132Q8-0011-R5a-SM-5IJDM 52.7
GTEX-131YS-0011-R5b-SM-5K7YB 51.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 51.0
GTEX-14BIM-0011-R5b-SM-5S2RM 51.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 50.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50.0
GTEX-13O3O-0011-R5b-SM-5KM44 48.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 48.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 47.9
GTEX-13OW5-0011-R5b-SM-5L3FR 47.5
GTEX-11NV4-0011-R5a-SM-5NQ88 47.2
GTEX-Z93S-0011-R5b-SM-4RGNI 47.2
GTEX-13OW7-0011-R5b-SM-5O9DM 47.0
GTEX-13OVL-0011-R5b-SM-5L3FU 46.8
GTEX-S7SE-0011-R5A-SM-2XCDA 46.7
GTEX-145LS-0011-R5a-SM-5SI65 45.5
GTEX-RU72-0011-R5A-SM-2TF6U 45.3
GTEX-13VXU-0011-R5a-SM-5O9D7 45.2
GTEX-1399T-0011-R5b-SM-5IJDK 44.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 44.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 44.6
GTEX-12WSF-0011-R5a-SM-5HL8K 44.4
GTEX-13NYB-0011-R5a-SM-5MR45 44.2
GTEX-13OVH-0011-R5b-SM-5KM4L 43.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 43.0
GTEX-13FLV-0011-R5a-SM-5LZWT 42.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 42.3
GTEX-14ABY-0011-R5b-SM-5SI7B 42.2
GTEX-ZXG5-0011-R5b-SM-57WBN 42.0
GTEX-139TS-0011-R5b-SM-5J2MZ 41.9
GTEX-NL3H-0011-R5a-SM-2I3GB 41.9
GTEX-YFC4-0011-R5a-SM-4RGLR 41.1
GTEX-1313W-0011-R5b-SM-5L3EP 41.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 40.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 40.2
GTEX-13NYS-0011-R5a-SM-5MR4D 39.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 39.6
GTEX-13FLW-0011-R5a-SM-5LZX6 39.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 38.5
GTEX-11OF3-0011-R5a-SM-57WB4 37.0
GTEX-13JVG-0011-R5a-SM-5MR4O 36.5
GTEX-NL4W-0011-R5a-SM-2I3GD 36.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 36.4
GTEX-144GO-0011-R5a-SM-5PNUR 36.3
GTEX-QMR6-0011-R5A-SM-32PKT 36.1
GTEX-13X6J-0011-R5b-SM-5PNWT 35.8
GTEX-XOTO-0011-R5A-SM-4B657 35.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 35.8
GTEX-14BIN-0011-R5b-SM-5SI78 35.5
GTEX-X261-0011-R5A-SM-3NMB4 35.3
GTEX-T6MN-0011-R5A-SM-32QPD 35.2
GTEX-TSE9-0011-R5A-SM-3DB7J 35.2
GTEX-13X6K-0011-R5b-SM-5PNUE 35.0
GTEX-OHPN-0011-R5A-SM-2I5FF 34.6
GTEX-T5JC-0011-R5A-SM-32PLK 34.2
GTEX-P44H-0011-R5A-SM-2XCEX 33.0
GTEX-RVPU-0011-R5A-SM-2XCAD 32.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 32.7
GTEX-12WSC-0011-R5b-SM-5CVNS 32.4
GTEX-12WSD-0011-R5b-SM-5CVNG 32.4
GTEX-ZE7O-0011-R5a-SM-57WBO 32.4
GTEX-144GL-0011-R5b-SM-5PNUJ 31.7
GTEX-11H98-0011-R5b-SM-57WCF 31.6
GTEX-1445S-0011-R5a-SM-5PNUS 30.7
GTEX-ZUA1-0011-R5b-SM-51MTG 30.2
GTEX-12ZZX-0011-R5a-SM-5HL89 28.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 27.5
GTEX-13FHP-0011-R5b-SM-5LZY2 26.7
GTEX-ZVT3-0011-R5a-SM-51MSI 25.3
GTEX-OXRN-0011-R5A-SM-2I5EF 24.9
GTEX-12WSB-0011-R5b-SM-5GU67 24.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 24.0
GTEX-13112-0011-R5b-SM-5DUV8 23.8
GTEX-11UD1-0011-R5b-SM-5P9FP 22.8
GTEX-T2IS-0011-R5A-SM-32QP4 22.7
GTEX-13CZV-0011-R5a-SM-5K7XA 22.6
GTEX-NPJ7-0011-R5a-SM-33HBK 21.4
GTEX-11WQC-0011-R5a-SM-5BC74 20.2
GTEX-S7PM-0011-R5A-SM-3NM8G 19.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 19.5
GTEX-13CIG-0011-R5b-SM-5L3F2 18.7
GTEX-1477Z-0011-R5b-SM-5PNUO 18.5
GTEX-ZV68-0011-R5a-SM-4YCDW 17.5
GTEX-13CF2-0011-R5a-SM-5LZWS 15.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 14.8
GTEX-YJ89-0011-R5a-SM-4V6GM 14.6
GTEX-13NZA-0011-R5b-SM-5KM4K 14.3
GTEX-139T8-0011-R5b-SM-5J1MO 14.0
GTEX-145MG-0011-R5b-SM-5S2VU 13.5
GTEX-12WSH-0011-R5b-SM-5P9F3 12.4
GTEX-12WSA-0011-R5b-SM-5GU5I 11.2
GTEX-139TT-0011-R5b-SM-5K7W8 11.1
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

274.4

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 274.4
FF:10164-103B2 76 years, female 364.7
FF:10379-105H1 89 years, female 184.1

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