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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:117.0TPM
GTEx:50.0RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:High
Neuronal cells:High
Neuropil:Not detected
 

Antibody staining

Antibody HPA041411

 

Endothelial cells

Medium  

Glial cells

High  

Neuronal cells

High  

Neuropil

Not detected  
 
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

117.0

N/A Male, age 5
Sample 1
TPM: 96.1
overview Female, age 40
Sample 2
TPM: 161.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 93.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

50.0

GTEx sample id

RPKM

52.061.671.236.596.2020406080100120140160
 
52.061.671.236.596.2020406080100120140160

Brain - Cortex

Brain - Cortex
RPKM: 63.4
Samples: 114

Max RPKM: 163.3
Min RPKM: 22.6
Std RPKM: 18.7
Median RPKM: 61.6
GTEX-11OF3-2926-SM-5HL78 163.3
GTEX-NPJ8-1526-SM-2D7VU 118.0
GTEX-13G51-3026-SM-5IJB8 116.6
GTEX-N7MT-1126-SM-5SI7V 104.6
GTEX-12ZZY-3026-SM-5GCOU 104.0
GTEX-X585-3026-SM-46MWF 100.2
GTEX-1192X-3126-SM-5N9BY 96.2
GTEX-13FXS-3126-SM-5J2NN 94.2
GTEX-13NYS-3126-SM-5KLYV 87.5
GTEX-UTHO-3026-SM-3GAFB 85.9
GTEX-X4XX-3026-SM-3NMB2 83.9
GTEX-111FC-3126-SM-5GZZ2 81.4
GTEX-145MF-2726-SM-5O995 80.9
GTEX-13NYB-3026-SM-5IJD7 77.9
GTEX-T6MN-2626-SM-32PMQ 76.6
GTEX-11GSO-2926-SM-5HL73 76.0
GTEX-1313W-3126-SM-5LZUI 75.8
GTEX-13VXU-2926-SM-5LU5C 75.7
GTEX-13OW6-3026-SM-5J2MI 75.5
GTEX-132Q8-3026-SM-5PNVG 75.2
GTEX-13OW8-2826-SM-5L3GC 74.9
GTEX-YFC4-3126-SM-5PNV6 74.8
GTEX-WL46-2926-SM-3LK82 74.7
GTEX-11GS4-3126-SM-5A5LH 74.2
GTEX-14ASI-3026-SM-5S2PN 73.9
GTEX-XOTO-3026-SM-4B65M 73.6
GTEX-14BMV-3026-SM-5S2PQ 73.5
GTEX-QMR6-1426-SM-32PLA 73.3
GTEX-11ONC-2926-SM-5P9JM 71.6
GTEX-117XS-3026-SM-5N9CA 70.1
GTEX-TSE9-3026-SM-3DB76 69.6
GTEX-ZAK1-3026-SM-5S2MJ 69.1
GTEX-12ZZX-2926-SM-5GCOQ 68.3
GTEX-ZYFD-3026-SM-5E44C 68.3
GTEX-13SLX-3126-SM-5S2Q5 68.1
GTEX-Q2AG-2926-SM-2HMJ3 67.8
GTEX-XLM4-3026-SM-4AT6L 67.3
GTEX-ZUA1-3026-SM-59HJC 67.0
GTEX-1128S-2726-SM-5H12C 66.8
GTEX-13FHO-3026-SM-5J1O9 66.6
GTEX-RNOR-2326-SM-2TF4I 66.6
GTEX-ZZPT-3026-SM-5GZXH 65.7
GTEX-13OVH-3026-SM-5MR4N 65.6
GTEX-144GL-3026-SM-5Q5CW 65.0
GTEX-QVUS-2826-SM-3GADB 65.0
GTEX-Y111-2726-SM-4TT3N 64.6
GTEX-145MH-3026-SM-5Q5DZ 64.4
GTEX-PVOW-2526-SM-2XCF7 64.3
GTEX-ZAJG-3126-SM-5HL9J 64.2
GTEX-13JUV-2926-SM-5LZX7 63.8
GTEX-11DXW-1126-SM-5H12Q 63.6
GTEX-13FHP-3026-SM-5IJBS 63.4
GTEX-QVJO-1426-SM-2S1QY 63.0
GTEX-WZTO-2926-SM-3NM9I 63.0
GTEX-QDT8-2926-SM-32PKC 62.7
GTEX-13NYC-2826-SM-5K7WR 62.4
GTEX-12126-1026-SM-5P9JJ 61.8
GTEX-1399T-3026-SM-5KLZC 61.4
GTEX-13FLW-1426-SM-5K7YE 61.1
GTEX-11OC5-0726-SM-5P9JK 60.9
GTEX-12WSC-3026-SM-5GCNF 60.9
GTEX-11DXY-3226-SM-5GIDE 60.7
GTEX-13JVG-3126-SM-5L3FH 59.5
GTEX-145LS-3126-SM-5Q5BY 59.5
GTEX-12ZZZ-3026-SM-5BC67 58.9
GTEX-131YS-3126-SM-5KLYT 58.5
GTEX-12WSD-3126-SM-5HL7P 57.3
GTEX-T2IS-3026-SM-32QPM 57.3
GTEX-1117F-3226-SM-5N9CT 57.0
GTEX-ZVT3-3026-SM-5E43N 57.0
GTEX-13O3Q-2926-SM-5KM45 56.8
GTEX-11NUK-2926-SM-5A5MD 56.5
GTEX-13OVJ-2826-SM-5L3GW 56.2
GTEX-13O3O-3126-SM-5KM3H 56.0
GTEX-12WSA-2926-SM-5EQ4D 55.8
GTEX-13QIC-2926-SM-5J2NF 55.7
GTEX-NPJ7-2726-SM-2I3FT 55.0
GTEX-11ZUS-2926-SM-5FQSL 54.7
GTEX-11PRG-2926-SM-5987A 54.1
GTEX-YJ89-3026-SM-5IFJI 54.0
GTEX-144FL-3026-SM-5O99C 53.5
GTEX-11WQK-3026-SM-5EQL6 53.0
GTEX-13S7M-3126-SM-5RQJQ 52.6
GTEX-WHSE-3026-SM-3P5ZH 52.3
GTEX-R55F-1326-SM-5S2V4 52.0
GTEX-T5JC-2426-SM-3NMDB 52.0
GTEX-RU72-3026-SM-5SI7Y 51.8
GTEX-WWYW-3126-SM-3NB39 51.4
GTEX-Z93S-2926-SM-57WB9 51.4
GTEX-11EMC-3226-SM-5EGKW 50.6
GTEX-WVLH-3026-SM-3MJG9 50.0
GTEX-13PVQ-3026-SM-5SI93 49.1
GTEX-13X6J-3026-SM-5Q5CU 47.8
GTEX-OXRN-2426-SM-2I5EQ 47.0
GTEX-14A5I-2926-SM-5Q5CQ 46.3
GTEX-13OW7-3026-SM-5L3GY 45.7
GTEX-11GSP-3226-SM-5986O 45.5
GTEX-12WSH-3026-SM-5CVNI 45.3
GTEX-147GR-3026-SM-5S2ML 45.3
GTEX-139T8-1026-SM-5J2MC 44.9
GTEX-13IVO-2926-SM-5L3CZ 44.9
GTEX-11EI6-3026-SM-5GZZO 44.3
GTEX-13X6K-2926-SM-5Q5D5 43.1
GTEX-12ZZW-2926-SM-5LZUP 43.0
GTEX-1445S-3026-SM-5O9BR 42.9
GTEX-11O72-2926-SM-5BC4V 42.5
GTEX-PWO3-0926-SM-2I5EY 41.6
GTEX-Y8DK-0826-SM-4TT3T 41.3
GTEX-11TTK-2926-SM-5PNYP 41.1
GTEX-145MG-3026-SM-5RQJA 40.2
GTEX-131XW-3126-SM-5LZUC 40.1
GTEX-13PL6-3126-SM-5LUAR 37.8
GTEX-11NV4-2126-SM-5N9DS 36.5
GTEX-ZE7O-3126-SM-5HL5X 22.6
Show all
27.437.543.06.960.2010203040506070
 
27.437.543.06.960.2010203040506070

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 35.8
Samples: 108

Max RPKM: 78.3
Min RPKM: 6.9
Std RPKM: 11.8
Median RPKM: 37.5
GTEX-X585-0011-R10A-SM-46MUY 78.3
GTEX-XLM4-0011-R10A-SM-4AT5P 60.2
GTEX-X4XX-0011-R10B-SM-46MWO 59.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 58.4
GTEX-XMD1-0011-R10A-SM-4AT4A 55.7
GTEX-131XH-0011-R10a-SM-5EGLJ 52.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 52.2
GTEX-QVJO-0011-R10A-SM-2S1QJ 52.2
GTEX-13CZV-0011-R10b-SM-5LZYD 51.2
GTEX-13OVL-0011-R10a-SM-5L3GS 50.0
GTEX-13FHO-0011-R10b-SM-5J2MM 49.9
GTEX-12WSF-0011-R10a-SM-5LZVH 49.3
GTEX-WVLH-0011-R10A-SM-3MJFM 48.4
GTEX-145MH-0011-R10b-SM-5PNUK 47.5
GTEX-Q2AG-0011-R10A-SM-2HMLA 47.1
GTEX-NL3H-0011-R10A-SM-2I3E9 46.4
GTEX-QDT8-0011-R10A-SM-32PKG 46.0
GTEX-WZTO-0011-R10B-SM-4E3KB 45.8
GTEX-ZF28-0011-R10a-SM-4WWEH 45.7
GTEX-13OVJ-0011-R10b-SM-5L3HT 45.3
GTEX-13RTJ-0011-R10b-SM-5O9CW 44.4
GTEX-13OW8-0011-R10a-SM-5L3H6 43.6
GTEX-NPJ7-0011-R10A-SM-2I3E5 43.5
GTEX-ZAB4-0011-R10a-SM-4SOKH 43.5
GTEX-13OW6-0011-R10a-SM-5L3HE 43.3
GTEX-13QIC-0011-R10a-SM-5O9C7 43.2
GTEX-13N1W-0011-R10b-SM-5MR4H 43.1
GTEX-132Q8-0011-R10b-SM-5DUWZ 43.0
GTEX-WL46-0011-R10A-SM-3MJFQ 42.9
GTEX-11GSP-0011-R10a-SM-5NQ7J 42.8
GTEX-12ZZX-0011-R10b-SM-5DUWK 42.8
GTEX-13FLW-0011-R10b-SM-5LZZF 42.8
GTEX-S7SE-0011-R10A-SM-2XCDF 42.8
GTEX-QVUS-0011-R10A-SM-3GIK3 42.6
GTEX-T6MN-0011-R10A-SM-32QP7 42.5
GTEX-145LS-0011-R10a-SM-5PNUQ 42.4
GTEX-13NYB-0011-R10a-SM-5KM43 42.1
GTEX-14ASI-0011-R10b-SM-5S2VZ 42.1
GTEX-YFC4-0011-R10a-SM-4SOK5 42.1
GTEX-131YS-0011-R10b-SM-5EQ5N 41.5
GTEX-13N2G-0011-R10a-SM-5MR34 40.6
GTEX-13QJC-0011-R10a-SM-5SI63 39.9
GTEX-13X6K-0011-R10a-SM-5P9JR 39.8
GTEX-13OW7-0011-R10a-SM-5L3H3 39.7
GTEX-13JUV-0011-R10b-SM-5LZXR 39.6
GTEX-14BIL-0011-R10a-SM-5SI75 39.5
GTEX-13SLW-0011-R10a-SM-5S2UI 39.1
GTEX-TSE9-0011-R10A-SM-3DB7O 39.1
GTEX-WWYW-0011-R10A-SM-3NB35 39.1
GTEX-T5JC-0011-R10A-SM-32PM2 38.8
GTEX-QMR6-0011-R10A-SM-32PKO 38.2
GTEX-13SLX-0011-R10a-SM-5P9HV 38.1
GTEX-13O3Q-0011-R10b-SM-5KM39 37.9
GTEX-ZDXO-0011-R10a-SM-4WWD8 37.8
GTEX-Y8DK-0011-R10A-SM-4SOK1 37.3
GTEX-13FXS-0011-R10a-SM-5J2MA 37.2
GTEX-N7MT-0011-R10A-SM-2I3E1 36.8
GTEX-1313W-0011-R10b-SM-5DUXA 36.6
GTEX-13G51-0011-R10b-SM-5LZYF 35.8
GTEX-11H98-0011-R10b-SM-5NQ98 35.7
GTEX-12WSE-0011-R10b-SM-5P9JV 33.7
GTEX-13NYS-0011-R10a-SM-5MR4S 33.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 32.8
GTEX-N7MS-0011-R10A-SM-2HMJK 32.7
GTEX-1477Z-0011-R10b-SM-5S2RF 32.5
GTEX-NL4W-0011-R10A-SM-2I3DY 32.5
GTEX-11WQC-0011-R10a-SM-57WCT 32.1
GTEX-13S7M-0011-R10b-SM-5PNZB 32.1
GTEX-12WSM-0011-R10a-SM-5DUWV 32.0
GTEX-ZE7O-0011-R10a-SM-57WAZ 31.4
GTEX-12WSA-0011-R10b-SM-5P9ET 31.3
GTEX-YJ89-0011-R10a-SM-4SOK9 31.0
GTEX-12WSH-0011-R10a-SM-5LZUS 30.8
GTEX-13JVG-0011-R10b-SM-5KM2P 30.5
GTEX-147F4-0011-R10b-SM-5S2WC 29.9
GTEX-Z93S-0011-R10a-SM-4RGNM 29.9
GTEX-X4EP-0011-R10B-SM-4QASJ 29.4
GTEX-OXRN-0011-R10A-SM-2I5GC 28.7
GTEX-1445S-0011-R10a-SM-5PNWB 28.0
GTEX-ZVT3-0011-R10b-SM-57WB6 27.9
GTEX-13X6I-0011-R10a-SM-5PNWI 27.7
GTEX-X261-0011-R10B-SM-4E3JT 26.3
GTEX-13O3O-0011-R10a-SM-5LUA9 26.2
GTEX-147GR-0011-R10b-SM-5S2UM 25.2
GTEX-12ZZZ-0011-R10a-SM-5P9HC 24.8
GTEX-11ZUS-0011-R10b-SM-5BC79 24.6
GTEX-12126-0011-R10b-SM-5BC6T 24.6
GTEX-ZUA1-0011-R10a-SM-51MT6 23.9
GTEX-145MG-0011-R10a-SM-5PNWG 23.5
GTEX-RVPU-0011-R10A-SM-2XCAH 23.3
GTEX-13X6J-0011-R10b-SM-5PNWA 22.9
GTEX-ZVZQ-0011-R10b-SM-51MRT 22.2
GTEX-13IVO-0011-R10a-SM-5LZY3 21.8
GTEX-P44H-0011-R10A-SM-2XCEK 21.7
GTEX-145LU-0011-R10a-SM-5PNWJ 21.5
GTEX-ZXG5-0011-R10a-SM-57WDD 21.5
GTEX-14BIN-0011-R10a-SM-5S2UA 21.4
GTEX-12WSC-0011-R10a-SM-5GU57 21.2
GTEX-14753-0011-R10b-SM-5S2WE 20.7
GTEX-13NZA-0011-R10b-SM-5KM54 20.3
GTEX-12ZZW-0011-R10b-SM-5HL9X 19.0
GTEX-131XW-0011-R10a-SM-5DUVA 18.9
GTEX-11WQK-0011-R10a-SM-5BC6R 18.3
GTEX-ZV68-0011-R10a-SM-51MT7 17.3
GTEX-OXRO-0011-R10A-SM-2I5EH 14.6
GTEX-12ZZY-0011-R10b-SM-5HL7W 13.0
GTEX-139TS-0011-R10a-SM-5K7TU 9.2
GTEX-12WSD-0011-R10b-SM-5GU79 6.9
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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