We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SRRM2
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:36.1RPKM
FANTOM5:290.8Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Medium
 

Antibody staining

Antibody HPA041411

 

Glial cells

Medium  

Neuronal cells

Medium  
 
 
 

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

36.1

GTEx sample id

RPKM

23.633.845.04.266.60102030405060708090
 
23.633.845.04.266.60102030405060708090

Brain - Hippocampus

Brain - Hippocampus
RPKM: 36.1
Samples: 94

Max RPKM: 92.7
Min RPKM: 4.2
Std RPKM: 17.6
Median RPKM: 33.8
GTEX-UTHO-0011-R1A-SM-3GIJO 92.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 89.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 85.5
GTEX-X4XX-0011-R1B-SM-3P622 78.6
GTEX-QVUS-0011-R1A-SM-3GAD2 66.6
GTEX-13G51-0011-R1a-SM-5LZYR 65.8
GTEX-13OW5-0011-R1b-SM-5L3GE 65.2
GTEX-WL46-0011-R1A-SM-3LK6M 64.0
GTEX-XMD1-0011-R1A-SM-4AT4C 59.1
GTEX-13OW6-0011-R1a-SM-5L3HQ 59.0
GTEX-WZTO-0011-R1B-SM-3NMAR 58.1
GTEX-QVJO-0011-R1A-SM-2S1QI 57.8
GTEX-13QJC-0011-R1b-SM-5S2UU 56.3
GTEX-11GSO-0011-R1b-SM-57WD3 54.9
GTEX-132Q8-0011-R1a-SM-5EGLK 54.1
GTEX-NPJ8-0011-R1a-SM-33HCB 51.9
GTEX-N7MT-0011-R1a-SM-5SI7S 49.3
GTEX-13OVL-0011-R1a-SM-5L3H5 49.0
GTEX-X585-0011-R1B-SM-46MVE 47.8
GTEX-R55E-0011-R1A-SM-2TC6N 46.8
GTEX-13JUV-0011-R1a-SM-5LZY4 46.6
GTEX-145LS-0011-R1b-SM-5PNUP 46.3
GTEX-ZAB4-0011-R1a-SM-4RGNO 45.5
GTEX-RNOR-0011-R1A-SM-5SI8F 45.4
GTEX-WWYW-0011-R1A-SM-3TW8G 43.7
GTEX-ZUA1-0011-R1a-SM-4YCE2 42.7
GTEX-13JVG-0011-R1a-SM-5KM32 42.5
GTEX-13N1W-0011-R1b-SM-5MR4T 41.0
GTEX-WVLH-0011-R1A-SM-4MVOK 40.8
GTEX-13N2G-0011-R1b-SM-5MR3G 40.7
GTEX-XOTO-0011-R1B-SM-4B65C 40.7
GTEX-13NZA-0011-R1b-SM-5LUAF 40.3
GTEX-13FHO-0011-R1b-SM-5KLZG 40.1
GTEX-1212Z-0011-R1b-SM-5BC72 40.0
GTEX-131XH-0011-R1a-SM-5DUWA 39.8
GTEX-12WSB-0011-R1b-SM-5P9EY 38.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 36.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 36.6
GTEX-145MH-0011-R1b-SM-5PNWY 36.3
GTEX-13S7M-0011-R1b-SM-5PNZE 36.1
GTEX-13NYS-0011-R1b-SM-5MR55 36.0
GTEX-14ASI-0011-R1b-SM-5S2TY 35.4
GTEX-13OW7-0011-R1b-SM-5L3HF 35.3
GTEX-QDT8-0011-R1A-SM-32PKS 34.8
GTEX-131YS-0011-R1a-SM-5DUXC 34.5
GTEX-11ONC-0011-R1a-SM-57WD4 33.8
GTEX-T5JC-0011-R1A-SM-32PM6 33.8
GTEX-13X6I-0011-R1b-SM-5PNZC 33.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 33.4
GTEX-11UD1-0011-R1b-SM-5BC7D 32.7
GTEX-T6MN-0011-R1A-SM-32QOY 32.5
GTEX-1313W-0011-R1b-SM-5EQ4A 32.3
GTEX-PVOW-0011-R1A-SM-32PL6 32.2
GTEX-13SLW-0011-R1a-SM-5S2W7 32.0
GTEX-NPJ7-0011-R1a-SM-3GACT 31.9
GTEX-12WSD-0011-R1b-SM-5LZVY 31.6
GTEX-13OW8-0011-R1a-SM-5L3HI 31.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 29.5
GTEX-12WSF-0011-R1a-SM-5DUVI 29.3
GTEX-13NYB-0011-R1b-SM-5KM4F 29.0
GTEX-P44H-0011-R1A-SM-3NM8J 28.5
GTEX-TSE9-0011-R1A-SM-3DB7E 27.3
GTEX-N7MS-0011-R1a-SM-2HMJG 27.3
GTEX-S7SE-0011-R1A-SM-2XCDE 27.2
GTEX-13PDP-0011-R1a-SM-5PNX5 25.5
GTEX-139TT-0011-R1a-SM-5LZVD 25.5
GTEX-PWO3-0011-R1A-SM-2I5EW 25.3
GTEX-YFC4-0011-R1a-SM-4V6EH 24.8
GTEX-12WSE-0011-R1b-SM-5GU4V 24.7
GTEX-13FLW-0011-R1b-SM-5LZX2 24.2
GTEX-12WSM-0011-R1a-SM-5LZW6 23.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 23.3
GTEX-1399T-0011-R1b-SM-5DUWN 22.6
GTEX-11ZTS-0011-R1a-SM-5BC71 22.0
GTEX-13O3O-0011-R1b-SM-5KM2K 21.5
GTEX-QMR6-0011-R1A-SM-32PKW 21.1
GTEX-13FXS-0011-R1a-SM-5K7U6 20.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 20.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 20.0
GTEX-13CF2-0011-R1a-SM-5LZY1 19.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 18.6
GTEX-NL3H-0011-R1a-SM-48TDJ 18.4
GTEX-ZVZQ-0011-R1a-SM-57WBU 17.1
GTEX-YJ89-0011-R1a-SM-4RGLS 16.6
GTEX-13112-0011-R1b-SM-5HL7K 16.0
GTEX-144GO-0011-R1a-SM-5PNWO 16.0
GTEX-ZF28-0011-R1a-SM-4WWD1 14.9
GTEX-139T8-0011-R1a-SM-5HL75 14.6
GTEX-12WSH-0011-R1a-SM-5GU5V 14.4
GTEX-13FHP-0011-R1b-SM-5K7XL 13.6
GTEX-13FTY-0011-R1a-SM-5LZXE 9.7
GTEX-ZE7O-0011-R1a-SM-57WDM 9.1
GTEX-145LU-0011-R1a-SM-5Q5CE 4.6
GTEX-144GL-0011-R1a-SM-5PNZ5 4.2
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

290.8

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 290.8
FF:10153-102I9 76 years, female 455.5
FF:10169-103B7 60 years, female 222.3
FF:10374-105G5 89 years, female 194.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.