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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:139.1TPM
GTEx:198.1RPKM
FANTOM5:369.4Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA041411

 

Glandular cells

High  
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

139.1

overview Male, age 65
Sample 1
TPM: 152.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 149.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 134.4
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 120.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

198.1

GTEx sample id

RPKM

163.3193.4229.772.0313.5020406080100120140160180200220240260280300
 
163.3193.4229.772.0313.5020406080100120140160180200220240260280300

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 198.1
Samples: 88

Max RPKM: 313.5
Min RPKM: 72
Std RPKM: 52.4
Median RPKM: 193.5
GTEX-WFJO-0926-SM-4LVM2 313.5
GTEX-131XG-1726-SM-5LZUR 309.1
GTEX-WH7G-1626-SM-4LVMY 304.2
GTEX-XAJ8-0526-SM-47JYK 299.0
GTEX-Z9EW-0926-SM-5CVMM 295.7
GTEX-ZLFU-1526-SM-4WWBT 295.0
GTEX-YF7O-1826-SM-5IFIU 285.2
GTEX-ZC5H-2326-SM-4WAYT 279.4
GTEX-13O61-1326-SM-5KM31 278.4
GTEX-UPK5-2026-SM-4JBIM 272.2
GTEX-1399S-2026-SM-5KM4B 263.4
GTEX-ZVP2-1726-SM-5GU5P 258.9
GTEX-X15G-1426-SM-4PQZK 256.8
GTEX-11XUK-1426-SM-5EQMG 254.3
GTEX-11NSD-1726-SM-5N9C3 248.4
GTEX-11I78-1126-SM-5A5K5 244.4
GTEX-11DXZ-1326-SM-5H11X 243.3
GTEX-11P7K-1626-SM-5GU63 239.9
GTEX-13CF3-1226-SM-5LZXN 238.4
GTEX-Y9LG-1626-SM-5IFHM 233.5
GTEX-XBED-1426-SM-4AT4G 231.0
GTEX-1399U-2126-SM-5IFEZ 230.1
GTEX-13FH7-1226-SM-5IJFK 229.5
GTEX-VUSG-1726-SM-4KKZL 228.1
GTEX-11DXX-1626-SM-5H11H 226.2
GTEX-ZEX8-1826-SM-57WBH 224.7
GTEX-ZYWO-1526-SM-5SIAL 223.3
GTEX-12BJ1-1926-SM-5HL9Z 221.9
GTEX-11VI4-1626-SM-5EQKO 221.4
GTEX-145ME-0926-SM-5O9AR 221.0
GTEX-131XF-1326-SM-5GCMQ 220.4
GTEX-ZTSS-0926-SM-59865 220.3
GTEX-ZVZP-1826-SM-5GZXB 218.9
GTEX-XUZC-1426-SM-4BRV3 211.9
GTEX-ZXES-1526-SM-5NQ95 210.1
GTEX-11EQ9-1326-SM-5985X 207.6
GTEX-ZTX8-0526-SM-59HLD 206.8
GTEX-13113-1226-SM-5EGHT 206.8
GTEX-12WSK-1526-SM-5CVNO 204.4
GTEX-ZP4G-1626-SM-57WGD 204.3
GTEX-11P82-0826-SM-5P9GU 202.2
GTEX-ZZ64-0526-SM-5GZXM 198.6
GTEX-14E6E-1626-SM-5RQI7 197.0
GTEX-WQUQ-2426-SM-4MVNW 196.0
GTEX-1122O-1326-SM-5H11F 190.9
GTEX-Y114-1426-SM-4TT6W 190.5
GTEX-ZVT2-2126-SM-5NQ93 190.5
GTEX-14DAR-1426-SM-5RQIR 189.3
GTEX-111YS-1426-SM-5GID8 185.3
GTEX-ZQUD-0926-SM-57WE3 183.1
GTEX-YB5E-1526-SM-5IFIE 183.1
GTEX-117YX-0326-SM-5GICL 182.7
GTEX-133LE-1426-SM-5IFH1 182.3
GTEX-13O21-1026-SM-5IJDU 182.2
GTEX-145LT-1026-SM-5LU9O 181.5
GTEX-WRHK-1026-SM-4MVOD 180.1
GTEX-13PL7-2626-SM-5IFH4 177.0
GTEX-WEY5-1526-SM-4LMJF 176.6
GTEX-13QBU-1926-SM-5IJEW 175.3
GTEX-13OVI-1926-SM-5IJCG 174.1
GTEX-139T6-1026-SM-5IJGC 174.1
GTEX-WFG7-1726-SM-4LVME 172.7
GTEX-148VJ-2226-SM-5NQ9M 171.6
GTEX-XXEK-1026-SM-4BRUW 168.2
GTEX-ZQG8-2526-SM-57WEQ 166.6
GTEX-13RTK-0826-SM-5Q5C6 163.6
GTEX-VJYA-0926-SM-4KL1N 162.5
GTEX-1399R-2026-SM-5K7WN 157.6
GTEX-XGQ4-1326-SM-4GIDU 156.4
GTEX-ZPCL-1726-SM-57WEO 155.0
GTEX-13D11-0726-SM-5LZZB 153.4
GTEX-ZTPG-2626-SM-57WFX 152.7
GTEX-1192X-2526-SM-59868 152.6
GTEX-13111-1426-SM-5DUW3 142.8
GTEX-XMK1-1826-SM-4B66F 141.4
GTEX-ZLV1-1126-SM-4WWBW 140.1
GTEX-ZF2S-1726-SM-57WFT 131.7
GTEX-111CU-1326-SM-5NQ8L 129.4
GTEX-ZA64-1226-SM-5HL7B 129.1
GTEX-139YR-2226-SM-5IFFW 128.3
GTEX-X5EB-1626-SM-4E3IV 128.0
GTEX-13FTW-2026-SM-5IJE2 126.8
GTEX-ZPIC-2326-SM-57WDW 126.1
GTEX-ZYFG-2026-SM-5E43Y 120.6
GTEX-WFG8-1626-SM-4LVMB 106.0
GTEX-Y3IK-1726-SM-4YCCR 106.0
GTEX-YEC4-1726-SM-4W21E 99.7
GTEX-Y5LM-1626-SM-4VDTB 72.0
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

369.4

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 369.4
FF:10024-101D6 15,40,85 years, mixed 369.4

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