Cell atlas - TRANK1 - The Human Protein Atlas

We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.

TRANK1

TISSUE

CELL

CANCER

CELL ATLAS RNA EXPRESSION HUMAN CELLS

GENE/PROTEIN

Antibody validation

Dictionary
	Nucleoplasm

Human cell
	Nucleoplasm

Please wait until image is loaded before changing channels

GENERAL INFORMATION
Gene name	TRANK1
Gene description	Tetratricopeptide repeat and ankyrin repeat containing 1
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	2
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION
Summary	Localized to the nucleoplasm.
RNA cell category	Cell line enhanced (Daudi, HMC-1)
Protein evidence	Evidence at protein level
Main location	Localized to the Nucleoplasm (approved)

DATA RELIABILITY
Reliability score	Approved based on 1 antibody. HPA035508
	SHOW MORE

ASSAYS

RNA EXPRESSION OVERVIEW
RNA cell line category: Cell line enhanced (Daudi, HMC-1) Organ Origin Category Expression Alphabetical Cell lines sorted after organ of phenotypic resemblance. Cell lines sorted after biological source for establishment. Cell lines sorted after the cell line category according to Cellosaurus. Cell lines sorted on descending RNA expression. Cell lines sorted alphabetically.

HUMAN CELLS

Summary

Localized to the nucleoplasm.

Main location

Nucleoplasm (approved)


	Toggle channels	Low High G1 S G2 M N/A

Thumbnail	Antibody	Cell line	Location	Single-cell variation	Cell cycle dependent variation
	HPA035508	A-431	Nucleoplasm
	HPA035508	U-2 OS	Nucleoplasm
	HPA035508	U-251 MG	Nucleoplasm

GENE INFORMATION
Gene name	TRANK1 (HGNC Symbol)
Synonyms	KIAA0342, LBA1
Description	Tetratricopeptide repeat and ankyrin repeat containing 1 (HGNC Symbol)
Entrez gene summary
Chromosome	3
Cytoband	p22.2
Chromosome location (bp)	36826820 - 36945057
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000168016 (version 83.38)
Entrez gene	9881
UniProt	O15050 (UniProt - Evidence at transcript level)
neXtProt	NX_O15050
Antibodypedia	TRANK1 antibodies

PROTEIN BROWSER

TRANK1-001	TRANK1-003

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
TRANK1-001 ENSP00000416168 ENST00000429976	O15050 [Direct mapping] TPR and ankyrin repeat-containing protein 1 Show all	SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005524 [ATP binding] GO:0016787 [hydrolase activity] Show all	2925 aa 336.2 kDa	No	0
TRANK1-003 ENSP00000485569 ENST00000463764	A0A096LPF5 [Direct mapping] TPR and ankyrin repeat-containing protein 1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] Show all	137 aa 15.6 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.