Expression of SCARA5 in cancer - Summary

CANCER ATLAS

Gene description

Scavenger receptor class A, member 5

Protein class

Predicted intracellular proteins, Predicted membrane proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Liver cancer

STAINING SUMMARY

HPA024661

GENE INFORMATION
Gene name	SCARA5 (HGNC Symbol)
Synonyms	FLJ23907, MGC45780, NET33
Description	Scavenger receptor class A, member 5 (HGNC Symbol)
Entrez gene summary
Chromosome	8
Cytoband	p21.1
Chromosome location (bp)	27869882 - 27992727
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000168079 (version 83.38)
Entrez gene	286133
UniProt	Q6ZMJ2 (UniProt - Evidence at transcript level)
neXtProt	NX_Q6ZMJ2
Antibodypedia	SCARA5 antibodies

PROTEIN BROWSER

SCARA5-001	SCARA5-003	SCARA5-004	SCARA5-005

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
SCARA5-001 ENSP00000346990 ENST00000354914	Q6ZMJ2 [Direct mapping] Scavenger receptor class A member 5 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005044 [scavenger receptor activity] GO:0005515 [protein binding] GO:0005887 [integral component of plasma membrane] GO:0006879 [cellular iron ion homeostasis] GO:0006897 [endocytosis] GO:0006898 [receptor-mediated endocytosis] GO:0009986 [cell surface] GO:0010468 [regulation of gene expression] GO:0016020 [membrane] GO:0030193 [regulation of blood coagulation] GO:0034605 [cellular response to heat] GO:0034755 [iron ion transmembrane transport] GO:0070207 [protein homotrimerization] GO:0070287 [ferritin receptor activity] Show all	495 aa 54 kDa	No	1
SCARA5-003 ENSP00000369746 ENST00000380385	Q6ZMJ2 [Direct mapping] Scavenger receptor class A member 5 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0005044 [scavenger receptor activity] GO:0005887 [integral component of plasma membrane] GO:0006879 [cellular iron ion homeostasis] GO:0006897 [endocytosis] GO:0006898 [receptor-mediated endocytosis] GO:0010468 [regulation of gene expression] GO:0016020 [membrane] GO:0030193 [regulation of blood coagulation] GO:0034755 [iron ion transmembrane transport] GO:0070207 [protein homotrimerization] GO:0070287 [ferritin receptor activity] Show all	270 aa 28.9 kDa	No	1
SCARA5-004 ENSP00000428663 ENST00000524352	Q6ZMJ2 [Direct mapping] Scavenger receptor class A member 5 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0005044 [scavenger receptor activity] GO:0005887 [integral component of plasma membrane] GO:0006879 [cellular iron ion homeostasis] GO:0006897 [endocytosis] GO:0006898 [receptor-mediated endocytosis] GO:0010468 [regulation of gene expression] GO:0030193 [regulation of blood coagulation] GO:0034755 [iron ion transmembrane transport] GO:0070207 [protein homotrimerization] GO:0070287 [ferritin receptor activity] Show all	400 aa 43.3 kDa	No	1
SCARA5-005 ENSP00000430713 ENST00000518030	Q6ZMJ2 [Direct mapping] Scavenger receptor class A member 5 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005044 [scavenger receptor activity] GO:0005887 [integral component of plasma membrane] GO:0006879 [cellular iron ion homeostasis] GO:0006897 [endocytosis] GO:0006898 [receptor-mediated endocytosis] GO:0010468 [regulation of gene expression] GO:0030193 [regulation of blood coagulation] GO:0034755 [iron ion transmembrane transport] GO:0070207 [protein homotrimerization] GO:0070287 [ferritin receptor activity] Show all	357 aa 38.7 kDa	No	0