Tissue expression of RNF187 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	23.4	TPM
GTEx:	23.9	RPKM
FANTOM5:	62.9	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Chondrocytes:	Medium
Fibroblasts:	Medium
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA030098
Adipocytes	Not detected
Chondrocytes	Medium
Fibroblasts	Medium
Peripheral nerve	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Chondrocytes:	Medium
Fibroblasts:	Medium

Antibody staining	Antibody HPA030098
Adipocytes	Not detected
Chondrocytes	Medium
Fibroblasts	Medium

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	23.4

Female, age 80

Sample 1
TPM: 40.9

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 23.5

Female, age 57

Sample 3
TPM: 24.9

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 14.6

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 13.2

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	23.9

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 24.8

Samples: 350

Max RPKM: 41
Min RPKM: 13.1
Std RPKM: 3.8
Median RPKM: 24.7

GTEX-ZYVF-0226-SM-5GIEG

41.0

GTEX-13G51-2626-SM-5LZYW

40.6

GTEX-11EMC-2826-SM-5PNY6

38.5

GTEX-XMD2-0226-SM-4WWEE

37.2

GTEX-14BMV-0226-SM-5S2N2

35.8

GTEX-13FHP-0226-SM-5K7WD

35.0

GTEX-11GSO-2326-SM-5A5LX

33.8

GTEX-X15G-2326-SM-4PQZS

33.4

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 22.5

Samples: 227

Max RPKM: 41
Min RPKM: 9.8
Std RPKM: 5.8
Median RPKM: 22.4

GTEX-13IVO-2426-SM-5K7V9

41.0

GTEX-13X6H-1726-SM-5Q5EH

40.0

GTEX-11PRG-1526-SM-5HL6Z

36.2

GTEX-1399S-1426-SM-5PNYQ

35.9

GTEX-1212Z-0526-SM-5FQSQ

35.2

GTEX-131XH-0826-SM-5GCN8

34.9

GTEX-ZYT6-2126-SM-5GZZ4

34.6

GTEX-ZYW4-2226-SM-5GZYG

34.4

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	62.9

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 62.9

FF:10010-101C1

65,65,76 years, mixed

62.9