We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
RNF187
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:18.4TPM
GTEx:20.5RPKM
FANTOM5:73.3Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA030098

 

Glandular cells

High  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

18.4

overview Male, age 65
Sample 1
TPM: 17.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 18.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 18.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 18.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

20.5

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 20.5
Samples: 88

Max RPKM: 29.3
Min RPKM: 14.7
Std RPKM: 3
Median RPKM: 20.1
GTEX-X15G-1426-SM-4PQZK 29.3
GTEX-11NSD-1726-SM-5N9C3 28.2
GTEX-131XG-1726-SM-5LZUR 26.9
GTEX-WFG8-1626-SM-4LVMB 26.6
GTEX-VUSG-1726-SM-4KKZL 26.3
GTEX-ZC5H-2326-SM-4WAYT 26.3
GTEX-ZEX8-1826-SM-57WBH 25.5
GTEX-1192X-2526-SM-59868 24.9
GTEX-UPK5-2026-SM-4JBIM 24.5
GTEX-WRHK-1026-SM-4MVOD 24.4
GTEX-WQUQ-2426-SM-4MVNW 24.2
GTEX-Y5LM-1626-SM-4VDTB 24.2
GTEX-VJYA-0926-SM-4KL1N 23.9
GTEX-11VI4-1626-SM-5EQKO 23.4
GTEX-ZP4G-1626-SM-57WGD 23.2
GTEX-1399R-2026-SM-5K7WN 23.2
GTEX-13FH7-1226-SM-5IJFK 23.1
GTEX-XAJ8-0526-SM-47JYK 23.0
GTEX-Y3IK-1726-SM-4YCCR 23.0
GTEX-WH7G-1626-SM-4LVMY 22.5
GTEX-ZF2S-1726-SM-57WFT 22.4
GTEX-ZLFU-1526-SM-4WWBT 22.3
GTEX-Z9EW-0926-SM-5CVMM 22.2
GTEX-14E6E-1626-SM-5RQI7 22.1
GTEX-WFJO-0926-SM-4LVM2 22.0
GTEX-13111-1426-SM-5DUW3 22.0
GTEX-11I78-1126-SM-5A5K5 22.0
GTEX-11DXZ-1326-SM-5H11X 21.9
GTEX-11XUK-1426-SM-5EQMG 21.9
GTEX-ZTPG-2626-SM-57WFX 21.7
GTEX-13RTK-0826-SM-5Q5C6 21.7
GTEX-117YX-0326-SM-5GICL 21.6
GTEX-1399S-2026-SM-5KM4B 21.5
GTEX-YB5E-1526-SM-5IFIE 21.3
GTEX-13QBU-1926-SM-5IJEW 21.1
GTEX-14DAR-1426-SM-5RQIR 21.0
GTEX-12BJ1-1926-SM-5HL9Z 20.8
GTEX-11P82-0826-SM-5P9GU 20.7
GTEX-XMK1-1826-SM-4B66F 20.5
GTEX-XUZC-1426-SM-4BRV3 20.4
GTEX-13O61-1326-SM-5KM31 20.3
GTEX-148VJ-2226-SM-5NQ9M 20.3
GTEX-ZYFG-2026-SM-5E43Y 20.2
GTEX-111CU-1326-SM-5NQ8L 20.2
GTEX-ZZ64-0526-SM-5GZXM 20.0
GTEX-131XF-1326-SM-5GCMQ 19.5
GTEX-WEY5-1526-SM-4LMJF 19.4
GTEX-145ME-0926-SM-5O9AR 19.4
GTEX-11DXX-1626-SM-5H11H 19.1
GTEX-YEC4-1726-SM-4W21E 19.0
GTEX-XGQ4-1326-SM-4GIDU 19.0
GTEX-139YR-2226-SM-5IFFW 19.0
GTEX-1122O-1326-SM-5H11F 18.9
GTEX-ZA64-1226-SM-5HL7B 18.8
GTEX-ZYWO-1526-SM-5SIAL 18.8
GTEX-ZTX8-0526-SM-59HLD 18.8
GTEX-ZLV1-1126-SM-4WWBW 18.8
GTEX-ZXES-1526-SM-5NQ95 18.7
GTEX-YF7O-1826-SM-5IFIU 18.7
GTEX-ZVT2-2126-SM-5NQ93 18.6
GTEX-ZVP2-1726-SM-5GU5P 18.6
GTEX-11EQ9-1326-SM-5985X 18.6
GTEX-133LE-1426-SM-5IFH1 18.6
GTEX-13113-1226-SM-5EGHT 18.4
GTEX-ZQUD-0926-SM-57WE3 18.3
GTEX-1399U-2126-SM-5IFEZ 18.3
GTEX-ZTSS-0926-SM-59865 18.2
GTEX-ZPIC-2326-SM-57WDW 18.2
GTEX-11P7K-1626-SM-5GU63 18.0
GTEX-13FTW-2026-SM-5IJE2 18.0
GTEX-139T6-1026-SM-5IJGC 17.9
GTEX-13PL7-2626-SM-5IFH4 17.9
GTEX-13D11-0726-SM-5LZZB 17.9
GTEX-ZQG8-2526-SM-57WEQ 17.8
GTEX-13OVI-1926-SM-5IJCG 17.8
GTEX-13O21-1026-SM-5IJDU 17.6
GTEX-XBED-1426-SM-4AT4G 17.6
GTEX-Y114-1426-SM-4TT6W 17.6
GTEX-ZPCL-1726-SM-57WEO 17.5
GTEX-145LT-1026-SM-5LU9O 17.1
GTEX-13CF3-1226-SM-5LZXN 17.0
GTEX-ZVZP-1826-SM-5GZXB 16.7
GTEX-12WSK-1526-SM-5CVNO 16.6
GTEX-Y9LG-1626-SM-5IFHM 16.4
GTEX-111YS-1426-SM-5GID8 16.1
GTEX-XXEK-1026-SM-4BRUW 15.6
GTEX-X5EB-1626-SM-4E3IV 15.3
GTEX-WFG7-1726-SM-4LVME 14.7
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

73.3

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 73.3
FF:10024-101D6 15,40,85 years, mixed 73.3

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.