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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:15.1TPM
GTEx:8.3RPKM
FANTOM5:10.0Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Low
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA035887

  

Adipocytes

 Not detected  

Chondrocytes

 Low  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Medium
Fibroblasts:Low
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA035887

  

Adipocytes

 Low  

Chondrocytes

 Medium  

Fibroblasts

 Low  

Peripheral nerve

 Not detected  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

15.1
N/A Female, age 80
Sample 1
TPM: 15.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 16.2
N/A Female, age 57
Sample 3
TPM: 10.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 21.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 11.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

8.3

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 8.5
Samples: 350

Max RPKM: 19.4
Min RPKM: 2
Std RPKM: 2.2
Median RPKM: 8.3
GTEX-13G51-2626-SM-5LZYW 19.4
GTEX-Y5V6-2526-SM-5IFJV 17.0
GTEX-13FHP-0226-SM-5K7WD 16.8
GTEX-147GR-0426-SM-5S2OL 16.3
GTEX-14BMV-0226-SM-5S2N2 16.3
GTEX-13OVL-0326-SM-5IJCS 15.0
GTEX-POMQ-2326-SM-5S2VS 14.8
GTEX-ZDXO-2426-SM-5S2NJ 14.1
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 7.9
Samples: 227

Max RPKM: 14.3
Min RPKM: 2.7
Std RPKM: 2.3
Median RPKM: 7.8
GTEX-11PRG-1526-SM-5HL6Z 14.3
GTEX-12ZZX-1726-SM-5BC63 14.3
GTEX-12WSI-1526-SM-5GCNM 13.4
GTEX-13NZ9-2026-SM-5KM1U 13.0
GTEX-13NYS-0726-SM-5J1OR 12.7
GTEX-145MI-0826-SM-5SI95 12.7
GTEX-146FH-2026-SM-5SI9I 12.7
GTEX-11NV4-1426-SM-5BC4W 12.6
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

10.0

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 10.0
FF:10010-101C1 65,65,76 years, mixed 10.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.