Tissue expression of MECP2 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	22.5	TPM
GTEx:	7.8	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Medium
Glial cells:	High
Neuronal cells:	High
Neuropil:	Not detected

Antibody staining	Antibody HPA000593	Antibody HPA001341	Antibody CAB037264
Endothelial cells	High	Medium	High
Glial cells	High	Medium	High
Neuronal cells	High	Low	High
Neuropil	Not detected	Not detected	Not detected

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	22.5

Male, age 5

Sample 1
TPM: 22.4

Female, age 40

Sample 2
TPM: 21.2

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 24.0

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	7.8

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 7.6

Samples: 114

Max RPKM: 14.6
Min RPKM: 4.6
Std RPKM: 1.3
Median RPKM: 7.7

GTEX-11OF3-2926-SM-5HL78

14.6

GTEX-13FXS-3126-SM-5J2NN

11.5

GTEX-X4XX-3026-SM-3NMB2

9.8

GTEX-14ASI-3026-SM-5S2PN

9.6

GTEX-NPJ8-1526-SM-2D7VU

9.5

GTEX-1192X-3126-SM-5N9BY

9.4

GTEX-WWYW-3126-SM-3NB39

9.3

GTEX-12ZZY-3026-SM-5GCOU

9.2

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 7.9

Samples: 108

Max RPKM: 12.7
Min RPKM: 3
Std RPKM: 1.8
Median RPKM: 8.1

GTEX-Q2AG-0011-R10A-SM-2HMLA

12.7

GTEX-NL3H-0011-R10A-SM-2I3E9

12.4

GTEX-131XH-0011-R10a-SM-5EGLJ

11.8

GTEX-X4XX-0011-R10B-SM-46MWO

11.1

GTEX-X585-0011-R10A-SM-46MUY

10.5

GTEX-QVJO-0011-R10A-SM-2S1QJ

10.4

GTEX-12WSM-0011-R10a-SM-5DUWV

10.2

GTEX-13S7M-0011-R10b-SM-5PNZB

10.2

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue