Fields »
ABOUT
HELP
BLOG
SNUPN

CANCER ATLAS

Gene description

 Snurportin 1

Protein class

 Predicted intracellular proteins

Protein evidence

 Evidence at protein level
Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer

STAINING SUMMARY
CAB005004

GENE INFORMATION

Gene name

 SNUPN (HGNC Symbol)

Synonyms

 RNUT1, SNURPORTIN-1, Snurportin1

Description

 Snurportin 1 (HGNC Symbol)

Entrez gene summary

 The nuclear import of the spliceosomal snRNPs U1, U2, U4 and U5, is dependent on the presence of a complex nuclear localization signal. The latter is composed of the 5'-2,2,7-terminal trimethylguanosine (m3G) cap structure of the U snRNA and the Sm core domain. The protein encoded by this gene interacts specifically with m3G-cap and functions as an snRNP-specific nuclear import receptor. Alternatively spliced transcript variants encoding the same protein have been identified for this gene. [provided by RefSeq, Jul 2008]

Chromosome

 15

Cytoband

 q24.2

Chromosome location (bp)

 75598083 - 75626469

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000169371 (version 83.38)

Entrez gene

 10073

UniProt

 O95149 (UniProt - Evidence at protein level)

neXtProt

 NX_O95149

Antibodypedia

 SNUPN antibodies

PROTEIN BROWSER
SNUPN-001
SNUPN-002
SNUPN-003
SNUPN-004
SNUPN-005
SNUPN-006
SNUPN-007
SNUPN-008
SNUPN-009
SNUPN-010

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
SNUPN-001
ENSP00000309831
ENST00000308588
O95149 [Direct mapping]
Snurportin-1
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000339 [RNA cap binding]
GO:0000387 [spliceosomal snRNP assembly]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005643 [nuclear pore]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006606 [protein import into nucleus]
GO:0008565 [protein transporter activity]
GO:0010467 [gene expression]
GO:0034660 [ncRNA metabolic process]
GO:0061015 [snRNA import into nucleus]
GO:0070062 [extracellular exosome]
Show all
 360 aa
41.1 kDa 		No 0
SNUPN-002
ENSP00000454852
ENST00000564644
O95149 [Direct mapping]
Snurportin-1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000339 [RNA cap binding]
GO:0000387 [spliceosomal snRNP assembly]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005643 [nuclear pore]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006606 [protein import into nucleus]
GO:0008565 [protein transporter activity]
GO:0010467 [gene expression]
GO:0034660 [ncRNA metabolic process]
GO:0061015 [snRNA import into nucleus]
GO:0070062 [extracellular exosome]
Show all
 360 aa
41.1 kDa 		No 0
SNUPN-003
ENSP00000458053
ENST00000564675
O95149 [Direct mapping]
Snurportin-1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000339 [RNA cap binding]
GO:0000387 [spliceosomal snRNP assembly]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005643 [nuclear pore]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006606 [protein import into nucleus]
GO:0008565 [protein transporter activity]
GO:0010467 [gene expression]
GO:0034660 [ncRNA metabolic process]
GO:0061015 [snRNA import into nucleus]
GO:0070062 [extracellular exosome]
Show all
 360 aa
41.1 kDa 		No 0
SNUPN-004
ENSP00000456224
ENST00000567134
O95149 [Direct mapping]
Snurportin-1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000339 [RNA cap binding]
GO:0000387 [spliceosomal snRNP assembly]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005643 [nuclear pore]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006606 [protein import into nucleus]
GO:0008565 [protein transporter activity]
GO:0010467 [gene expression]
GO:0034660 [ncRNA metabolic process]
GO:0061015 [snRNA import into nucleus]
GO:0070062 [extracellular exosome]
Show all
 360 aa
41.1 kDa 		No 0
SNUPN-005
ENSP00000456742
ENST00000564086
H3BSK1 [Direct mapping]
Snurportin-1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0006606 [protein import into nucleus]
GO:0008565 [protein transporter activity]
Show all
 136 aa
15.7 kDa 		No 0
SNUPN-006
ENSP00000456260
ENST00000569817
H3BRI5 [Direct mapping]
Snurportin-1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0006606 [protein import into nucleus]
GO:0008565 [protein transporter activity]
Show all
 210 aa
24.4 kDa 		No 0
SNUPN-007
ENSP00000455649
ENST00000563875
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
 2 aa
0.3 kDa 		No 0
SNUPN-008
ENSP00000455894
ENST00000563793
H3BQR0 [Direct mapping]
Snurportin-1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0006606 [protein import into nucleus]
GO:0008565 [protein transporter activity]
Show all
 63 aa
7.3 kDa 		No 0
SNUPN-009
ENSP00000457093
ENST00000568162
H3BTA6 [Direct mapping]
Snurportin-1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0006606 [protein import into nucleus]
GO:0008565 [protein transporter activity]
Show all
 100 aa
11.7 kDa 		No 0
SNUPN-010
ENSP00000457562
ENST00000568078
H3BUB4 [Direct mapping]
Snurportin-1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
 200 aa
23.1 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.