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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA043368

 

Antibody HPA076524

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
 

Product name

HPA043368   HPA076524  

Host species

Rabbit   Rabbit  

Clonality

pAb   pAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand  

Other gene match

   

Released in version

10   16  

References

   

VALIDATION SUMMARY

 
 

Antibody HPA043368

 

Antibody HPA076524

 
Immunocytochemistry

  Supported  
Immunohistochemistry

Supported    
Western blot

Supported   Uncertain  
Protein array

Approved   Supported  

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA043368

 

Antibody HPA076524

 

Standard validation

  Supported  

   

Figure description

  Immunofluorescent staining of human cell line U-2 OS shows localization to nucleus & nucleoli.  

Antibody dilution

  1:103  

Literature conformity

  The subcellular location is supported by literature.  

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA043368

 

Antibody HPA076524

 

Standard validation

Supported    

   

Figure description

Immunohistochemical staining of human cerebral cortex shows distinct nuclear positivity in neuronal cells.    

Expression

RNA: detected in 37 tissues
Protein: detected in 50 cell types
   

Retrieval

HIER pH6    

Antibody dilution

1:800    

Literature conformity

Consistent with extensive gene/protein characterization data.    

RNA consistency

Mainly consistent with RNA expression data.    

WESTERN BLOT

 
 

Antibody HPA043368

 

Antibody HPA076524

 

Standard validation

Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
  Uncertain

Analysis performed using a standard panel of samples.
Only bands not corresponding to the predicted size.
 

   

Figure description

Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
   

Target mass (kDa)

233, 226.6, 222.9, 58.8, 11.9   233, 226.6, 222.9  

Antibody dilution

1:250   1:340  

PROTEIN ARRAY

 
 

Antibody HPA043368

 

Antibody HPA076524

 

Standard validation

Approved

Pass with quality comment low specificity (binding to 1-2 PrESTs >15% and <40%).
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
 

   

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.  

Antibody dilution

1:3000   1:4150  

ANTIGEN INFORMATION

 
 

Antibody HPA043368

 

Antibody HPA076524

 

Antigen

Recombinant protein fragment   Recombinant protein fragment  

Length (aa)

73   101  

Antigen sequence

LKIKLGLLGGKREKGGSYVFQSDEGPEPEAEESDLDSGSVHSASGRPDGP
VRTKKLKRGRPGRKKKKLLGCPA
 
PAPSEKGEGIRTPLEKEEAENQEEKPEKNSRIGEKMETEADAPSPAPSLG
ERLEPRKIPLEDEVPGVPGEMEPEPGYRGDREKSATESTPGERGEEKPLD
G
 

Matching transcripts

CHD3-001 - ENSP00000332628 [97%]
CHD3-002 - ENSP00000350907 [97%]
CHD3-003 - ENSP00000369716 [97%]
CHD3-006 - ENSP00000405861 [92%]
CHD3-015 - ENSP00000458861 [92%]
  CHD3-001 - ENSP00000332628 [100%]
CHD3-003 - ENSP00000369716 [100%]
CHD3-002 - ENSP00000350907 [84%]
 

Other gene match

   
ANTIGEN VIEW
CHD3-001
CHD3-002
CHD3-003
CHD3-006
CHD3-015
 

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