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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:4287.7TPM
GTEx:574.7RPKM
FANTOM5:1010.3Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA012601

 

Antibody CAB024713

 

Glandular cells

High   High  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

4287.7

overview Male, age 65
Sample 1
TPM: 2.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 11307.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 5409.1
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 432.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

574.7

GTEx sample id

RPKM

65.9408.9885.40.01928.002004006008001,0001,2001,4001,6001,8002,0002,2002,4002,6002,8003,000
 
65.9408.9885.40.01928.002004006008001,0001,2001,4001,6001,8002,0002,2002,4002,6002,8003,000

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 574.7
Samples: 88

Max RPKM: 3046.7
Min RPKM: 0
Std RPKM: 637.2
Median RPKM: 408.9
GTEX-XGQ4-1326-SM-4GIDU 3046.7
GTEX-YB5E-1526-SM-5IFIE 2864.8
GTEX-XUZC-1426-SM-4BRV3 2296.3
GTEX-ZZ64-0526-SM-5GZXM 1928.0
GTEX-ZYFG-2026-SM-5E43Y 1732.5
GTEX-133LE-1426-SM-5IFH1 1682.6
GTEX-13PL7-2626-SM-5IFH4 1647.2
GTEX-131XF-1326-SM-5GCMQ 1617.4
GTEX-ZA64-1226-SM-5HL7B 1540.9
GTEX-11P82-0826-SM-5P9GU 1369.5
GTEX-11P7K-1626-SM-5GU63 1257.9
GTEX-ZXES-1526-SM-5NQ95 1212.6
GTEX-ZYWO-1526-SM-5SIAL 1179.7
GTEX-11EQ9-1326-SM-5985X 1094.6
GTEX-145LT-1026-SM-5LU9O 1018.7
GTEX-WQUQ-2426-SM-4MVNW 1005.5
GTEX-X5EB-1626-SM-4E3IV 1004.5
GTEX-13113-1226-SM-5EGHT 998.9
GTEX-11DXX-1626-SM-5H11H 976.6
GTEX-14DAR-1426-SM-5RQIR 958.6
GTEX-XBED-1426-SM-4AT4G 958.5
GTEX-Y9LG-1626-SM-5IFHM 957.6
GTEX-11DXZ-1326-SM-5H11X 861.3
GTEX-YF7O-1826-SM-5IFIU 858.1
GTEX-1122O-1326-SM-5H11F 771.6
GTEX-12BJ1-1926-SM-5HL9Z 744.3
GTEX-ZVZP-1826-SM-5GZXB 725.4
GTEX-ZTSS-0926-SM-59865 712.9
GTEX-Y3IK-1726-SM-4YCCR 711.1
GTEX-ZLV1-1126-SM-4WWBW 682.1
GTEX-13FTW-2026-SM-5IJE2 641.3
GTEX-111YS-1426-SM-5GID8 613.4
GTEX-ZEX8-1826-SM-57WBH 603.9
GTEX-ZPCL-1726-SM-57WEO 536.9
GTEX-11NSD-1726-SM-5N9C3 523.3
GTEX-1399R-2026-SM-5K7WN 520.1
GTEX-13D11-0726-SM-5LZZB 517.7
GTEX-ZTX8-0526-SM-59HLD 512.7
GTEX-11I78-1126-SM-5A5K5 485.4
GTEX-WFJO-0926-SM-4LVM2 483.6
GTEX-YEC4-1726-SM-4W21E 479.4
GTEX-XAJ8-0526-SM-47JYK 453.3
GTEX-ZTPG-2626-SM-57WFX 450.5
GTEX-139YR-2226-SM-5IFFW 431.2
GTEX-11VI4-1626-SM-5EQKO 386.6
GTEX-14E6E-1626-SM-5RQI7 348.7
GTEX-13O61-1326-SM-5KM31 345.4
GTEX-13RTK-0826-SM-5Q5C6 338.4
GTEX-XXEK-1026-SM-4BRUW 328.1
GTEX-WH7G-1626-SM-4LVMY 235.7
GTEX-Y114-1426-SM-4TT6W 230.0
GTEX-WFG7-1726-SM-4LVME 196.0
GTEX-139T6-1026-SM-5IJGC 194.7
GTEX-13FH7-1226-SM-5IJFK 181.0
GTEX-11XUK-1426-SM-5EQMG 179.7
GTEX-ZVT2-2126-SM-5NQ93 155.0
GTEX-13O21-1026-SM-5IJDU 149.0
GTEX-X15G-1426-SM-4PQZK 146.6
GTEX-1399S-2026-SM-5KM4B 143.1
GTEX-13CF3-1226-SM-5LZXN 137.0
GTEX-Z9EW-0926-SM-5CVMM 135.6
GTEX-1399U-2126-SM-5IFEZ 122.6
GTEX-ZPIC-2326-SM-57WDW 118.0
GTEX-ZLFU-1526-SM-4WWBT 108.4
GTEX-12WSK-1526-SM-5CVNO 95.1
GTEX-111CU-1326-SM-5NQ8L 67.8
GTEX-WRHK-1026-SM-4MVOD 60.2
GTEX-ZP4G-1626-SM-57WGD 59.2
GTEX-13OVI-1926-SM-5IJCG 45.6
GTEX-1192X-2526-SM-59868 42.1
GTEX-ZVP2-1726-SM-5GU5P 42.1
GTEX-ZF2S-1726-SM-57WFT 40.0
GTEX-145ME-0926-SM-5O9AR 38.0
GTEX-13QBU-1926-SM-5IJEW 36.8
GTEX-148VJ-2226-SM-5NQ9M 35.0
GTEX-VUSG-1726-SM-4KKZL 31.7
GTEX-WFG8-1626-SM-4LVMB 30.0
GTEX-ZQUD-0926-SM-57WE3 19.7
GTEX-Y5LM-1626-SM-4VDTB 18.9
GTEX-13111-1426-SM-5DUW3 18.0
GTEX-ZQG8-2526-SM-57WEQ 17.6
GTEX-XMK1-1826-SM-4B66F 10.3
GTEX-117YX-0326-SM-5GICL 10.3
GTEX-WEY5-1526-SM-4LMJF 4.1
GTEX-131XG-1726-SM-5LZUR 3.6
GTEX-ZC5H-2326-SM-4WAYT 1.8
GTEX-UPK5-2026-SM-4JBIM 1.3
GTEX-VJYA-0926-SM-4KL1N 0.0
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

1010.3

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 1010.3
FF:10024-101D6 15,40,85 years, mixed 1010.3

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The Human Protein Atlas project is funded
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