Fields »
ABOUT
HELP
BLOG
TMED10

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:77.8TPM
GTEx:42.4RPKM
FANTOM5:168.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA047139

  

Antibody HPA050539

  

Antibody CAB034442

  

Antibody CAB037251

  

Endothelial cells

 Low   Not detected   Medium  

Glandular cells

 Medium   Medium   Medium   Medium  

Peripheral nerve/ganglion

 Medium   Medium  
       
       
       

COLON - HPA RNA-seq

Average TPM

77.8
overview Male, age 54
Sample 1
TPM: 73.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 63.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 55.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 78.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 51.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 75.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 89.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 84.0
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 80.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 102.0
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 101.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 85.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 71.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

42.4

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 38.8
Samples: 149

Max RPKM: 56.9
Min RPKM: 26.4
Std RPKM: 5.3
Median RPKM: 38.5
GTEX-148VJ-2426-SM-5NQ9Y 56.9
GTEX-11WQK-2526-SM-5CVL8 54.2
GTEX-14C39-1626-SM-5S2P4 53.6
GTEX-13SLW-2826-SM-5Q5ES 51.6
GTEX-13OVJ-1826-SM-5KM2D 51.1
GTEX-11GS4-1826-SM-5HL4T 48.2
GTEX-13O1R-2426-SM-5KLZZ 47.9
GTEX-XAJ8-0726-SM-47JY5 47.5
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 45.2
Samples: 196

Max RPKM: 73.8
Min RPKM: 24.5
Std RPKM: 8.2
Median RPKM: 44.2
GTEX-PWOO-1326-SM-48TCJ 73.8
GTEX-QDVN-1326-SM-48TZ3 67.9
GTEX-O5YT-1426-SM-3MJHC 66.7
GTEX-ZXES-1626-SM-5NQ7L 66.5
GTEX-132AR-2726-SM-5PNVN 66.3
GTEX-U4B1-1126-SM-4DXV3 64.2
GTEX-ZYWO-1626-SM-5E44H 64.1
GTEX-11TT1-1026-SM-5PNW7 63.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

168.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 168.2
FF:10014-101C5 62,83,84 years, mixed 168.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.