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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:30.2RPKM
FANTOM5:118.3Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:High
 

Antibody staining

Antibody HPA047139

 

Antibody HPA050539

 

Antibody CAB034442

 

Antibody CAB037251

 

Glial cells

Not detected   Not detected   Low   Medium  

Neuronal cells

High   High   High   High  
       
       
       

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

30.2

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 30.2
Samples: 94

Max RPKM: 69.3
Min RPKM: 8.8
Std RPKM: 11.6
Median RPKM: 29.5
GTEX-13OW5-0011-R1b-SM-5L3GE 69.3
GTEX-QVUS-0011-R1A-SM-3GAD2 67.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 61.6
GTEX-UTHO-0011-R1A-SM-3GIJO 54.9
GTEX-13JUV-0011-R1a-SM-5LZY4 50.1
GTEX-13G51-0011-R1a-SM-5LZYR 47.6
GTEX-13QJC-0011-R1b-SM-5S2UU 46.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 46.4
GTEX-13N1W-0011-R1b-SM-5MR4T 46.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 45.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 44.0
GTEX-13S7M-0011-R1b-SM-5PNZE 43.6
GTEX-P44H-0011-R1A-SM-3NM8J 42.8
GTEX-QMR6-0011-R1A-SM-32PKW 40.2
GTEX-NPJ8-0011-R1a-SM-33HCB 39.8
GTEX-131XH-0011-R1a-SM-5DUWA 39.6
GTEX-13NYS-0011-R1b-SM-5MR55 37.8
GTEX-13OVL-0011-R1a-SM-5L3H5 37.6
GTEX-WZTO-0011-R1B-SM-3NMAR 37.1
GTEX-X585-0011-R1B-SM-46MVE 37.1
GTEX-ZAB4-0011-R1a-SM-4RGNO 36.9
GTEX-11GSO-0011-R1b-SM-57WD3 36.4
GTEX-13N2G-0011-R1b-SM-5MR3G 36.2
GTEX-QDT8-0011-R1A-SM-32PKS 36.1
GTEX-QVJO-0011-R1A-SM-2S1QI 36.0
GTEX-N7MT-0011-R1a-SM-5SI7S 36.0
GTEX-13FHO-0011-R1b-SM-5KLZG 35.7
GTEX-XMD1-0011-R1A-SM-4AT4C 35.1
GTEX-WWYW-0011-R1A-SM-3TW8G 35.1
GTEX-T6MN-0011-R1A-SM-32QOY 34.2
GTEX-ZUA1-0011-R1a-SM-4YCE2 34.2
GTEX-145LS-0011-R1b-SM-5PNUP 33.7
GTEX-13X6I-0011-R1b-SM-5PNZC 32.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 32.4
GTEX-1212Z-0011-R1b-SM-5BC72 32.2
GTEX-PVOW-0011-R1A-SM-32PL6 31.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 31.7
GTEX-XOTO-0011-R1B-SM-4B65C 31.6
GTEX-PWO3-0011-R1A-SM-2I5EW 31.3
GTEX-131YS-0011-R1a-SM-5DUXC 31.2
GTEX-X4XX-0011-R1B-SM-3P622 31.0
GTEX-11UD1-0011-R1b-SM-5BC7D 30.7
GTEX-12WSH-0011-R1a-SM-5GU5V 30.6
GTEX-NPJ7-0011-R1a-SM-3GACT 30.0
GTEX-13JVG-0011-R1a-SM-5KM32 29.6
GTEX-11ZVC-0011-R1b-SM-5BC6M 29.6
GTEX-13OW6-0011-R1a-SM-5L3HQ 29.5
GTEX-14ASI-0011-R1b-SM-5S2TY 29.4
GTEX-132Q8-0011-R1a-SM-5EGLK 28.8
GTEX-13O3O-0011-R1b-SM-5KM2K 28.6
GTEX-12WSF-0011-R1a-SM-5DUVI 27.6
GTEX-N7MS-0011-R1a-SM-2HMJG 27.4
GTEX-144GL-0011-R1a-SM-5PNZ5 27.3
GTEX-T5JC-0011-R1A-SM-32PM6 27.3
GTEX-11ZTS-0011-R1a-SM-5BC71 27.1
GTEX-WL46-0011-R1A-SM-3LK6M 26.9
GTEX-S7SE-0011-R1A-SM-2XCDE 26.9
GTEX-12WSB-0011-R1b-SM-5P9EY 26.7
GTEX-YFC4-0011-R1a-SM-4V6EH 26.5
GTEX-1313W-0011-R1b-SM-5EQ4A 26.3
GTEX-13OW8-0011-R1a-SM-5L3HI 26.2
GTEX-13FXS-0011-R1a-SM-5K7U6 26.1
GTEX-12WSM-0011-R1a-SM-5LZW6 26.1
GTEX-13NZA-0011-R1b-SM-5LUAF 25.5
GTEX-145LU-0011-R1a-SM-5Q5CE 25.0
GTEX-139TT-0011-R1a-SM-5LZVD 24.9
GTEX-13SLW-0011-R1a-SM-5S2W7 24.6
GTEX-12WSD-0011-R1b-SM-5LZVY 24.6
GTEX-11ONC-0011-R1a-SM-57WD4 24.6
GTEX-13RTL-0011-R1a-SM-5PNZ8 24.4
GTEX-R55E-0011-R1A-SM-2TC6N 23.7
GTEX-RNOR-0011-R1A-SM-5SI8F 22.6
GTEX-13OW7-0011-R1b-SM-5L3HF 22.5
GTEX-12WSE-0011-R1b-SM-5GU4V 22.0
GTEX-1399T-0011-R1b-SM-5DUWN 20.9
GTEX-TSE9-0011-R1A-SM-3DB7E 20.6
GTEX-WVLH-0011-R1A-SM-4MVOK 20.3
GTEX-145MH-0011-R1b-SM-5PNWY 19.3
GTEX-13112-0011-R1b-SM-5HL7K 18.7
GTEX-13FLW-0011-R1b-SM-5LZX2 18.6
GTEX-YJ89-0011-R1a-SM-4RGLS 18.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 17.7
GTEX-13NYB-0011-R1b-SM-5KM4F 16.8
GTEX-139T8-0011-R1a-SM-5HL75 16.1
GTEX-144GO-0011-R1a-SM-5PNWO 15.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 15.4
GTEX-ZVZQ-0011-R1a-SM-57WBU 14.2
GTEX-13PDP-0011-R1a-SM-5PNX5 13.9
GTEX-13CF2-0011-R1a-SM-5LZY1 13.3
GTEX-ZF28-0011-R1a-SM-4WWD1 11.9
GTEX-NL3H-0011-R1a-SM-48TDJ 11.6
GTEX-13FHP-0011-R1b-SM-5K7XL 10.2
GTEX-ZE7O-0011-R1a-SM-57WDM 9.1
GTEX-13FTY-0011-R1a-SM-5LZXE 8.8
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

118.3

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 118.3
FF:10153-102I9 76 years, female 154.2
FF:10169-103B7 60 years, female 121.1
FF:10374-105G5 89 years, female 79.6

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