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Searches

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PLA2G1B
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TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

PLA2G1B

Gene description

Phospholipase A2, group IB (pancreas)

Protein class

Candidate cardiovascular disease genes
Enzymes
FDA approved drug targets
Predicted intracellular proteins
Predicted secreted proteins
RAS pathway related proteins

Predicted localization

Intracellular,Secreted

Number of transcripts

3
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Tissue enriched (pancreas)
GTEx:Tissue enriched (pancreas)
FANTOM5:Tissue enriched (pancreas)

Protein evidence

Evidence at protein level

Protein expression

Selective cytoplasmic expression in exocrine pancreas.

DATA RELIABILITY

Data reliability
description

Antibody staining consistent with RNA expression data.

Reliability score

Supported based on 2 antibodies.
HPA047822 , HPA060803
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Pancreas

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical
Cerebral cortexHippocampusCaudateCerebellumThyroid glandParathyroid glandAdrenal glandAppendixBone marrowLymph nodeTonsilSpleenHeart muscleSkeletal muscleSmooth muscleNasopharynxBronchusLungLiverGallbladderPancreasOral mucosaSalivary glandEsophagusStomachDuodenumSmall intestineColonRectumKidneyUrinary bladderTestisEpididymisProstateSeminal vesicleBreastVaginaCervix, uterineEndometriumFallopian tubeOvaryPlacentaAdipose tissueSoft tissueSkinNotdetectedLowMediumHighSCORE

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (pancreas)
Cerebral cortexThyroid glandParathyroid glandAdrenal glandAppendixBone marrowLymph nodeTonsilSpleenHeart muscleSkeletal muscleSmooth muscleLungLiverGallbladderPancreasSalivary glandEsophagusStomachDuodenumSmall intestineColonRectumKidneyUrinary bladderTestisEpididymisProstateSeminal vesicleBreastCervix, uterineEndometriumFallopian tubeOvaryPlacentaAdipose tissueSkin05,00010,00015,00020,00025,000TPM
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (pancreas)
HypothalamusPituitary glandCerebral cortexHippocampusCaudateCerebellumThyroid glandAdrenal glandSpleenHeart muscleSkeletal muscleLungLiverPancreasSalivary glandEsophagusStomachSmall intestineColonKidneyUrinary bladderTestisProstateBreastVaginaCervix, uterineEndometriumFallopian tubeOvaryAdipose tissueSkin02,0004,0006,0008,00010,00012,000RPKM
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (pancreas)
Pituitary glandBrainHippocampusCaudateCerebellumThyroid glandAppendixLymph nodeTonsilSpleenHeart muscleSkeletal muscleSmooth muscleLungLiverGallbladderPancreasSalivary glandEsophagusSmall intestineColonKidneyUrinary bladderTestisEpididymisProstateSeminal vesicleBreastVaginaCervix, uterineEndometriumOvaryPlacentaAdipose tissueRetina020,00040,00060,00080,000100,000120,000Tags Per Million

GENE INFORMATION

Gene name

PLA2G1B (HGNC Symbol)

Synonyms

PLA2, PLA2A, PPLA2

Description

Phospholipase A2, group IB (pancreas) (HGNC Symbol)

Entrez gene summary

This gene encodes a secreted member of the phospholipase A2 (PLA2) class of enzymes, which is produced by the pancreatic acinar cells. The encoded calcium-dependent enzyme catalyzes the hydrolysis of the sn-2 position of membrane glycerophospholipids to release arachidonic acid (AA) and lysophospholipids. AA is subsequently converted by downstream metabolic enzymes to several bioactive lipophilic compounds (eicosanoids), including prostaglandins (PGs) and leukotrienes (LTs). The enzyme may be involved in several physiological processes including cell contraction, cell proliferation and pathological response. [provided by RefSeq, Aug 2013]

Chromosome

12

Cytoband

q24.31

Chromosome location (bp)

120322111 - 120327789

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000170890 (version 83.38)

Entrez gene

5319

UniProt

P04054 (UniProt - Evidence at protein level)

neXtProt

NX_P04054

Antibodypedia

PLA2G1B antibodies

PROTEIN BROWSER

PLA2G1B-001
PLA2G1B-002
PLA2G1B-003

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

PLA2G1B-001
ENSP00000312286
ENST00000308366
P04054 [Direct mapping]
Phospholipase A2
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Enzymes
   ENZYME proteins
   Hydrolases
   MEMSAT3 predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
RAS pathway related proteins
Candidate cardiovascular disease genes
FDA approved drug targets
   Small molecule drugs
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000187 [activation of MAPK activity]
GO:0002227 [innate immune response in mucosa]
GO:0002446 [neutrophil mediated immunity]
GO:0004623 [phospholipase A2 activity]
GO:0005102 [receptor binding]
GO:0005509 [calcium ion binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0006633 [fatty acid biosynthetic process]
GO:0006644 [phospholipid metabolic process]
GO:0006654 [phosphatidic acid biosynthetic process]
GO:0007015 [actin filament organization]
GO:0007165 [signal transduction]
GO:0009986 [cell surface]
GO:0010524 [positive regulation of calcium ion transport into cytosol]
GO:0015758 [glucose transport]
GO:0016042 [lipid catabolic process]
GO:0019370 [leukotriene biosynthetic process]
GO:0019731 [antibacterial humoral response]
GO:0030141 [secretory granule]
GO:0030593 [neutrophil chemotaxis]
GO:0032052 [bile acid binding]
GO:0032431 [activation of phospholipase A2 activity]
GO:0032637 [interleukin-8 production]
GO:0032869 [cellular response to insulin stimulus]
GO:0035556 [intracellular signal transduction]
GO:0036148 [phosphatidylglycerol acyl-chain remodeling]
GO:0036149 [phosphatidylinositol acyl-chain remodeling]
GO:0036150 [phosphatidylserine acyl-chain remodeling]
GO:0036151 [phosphatidylcholine acyl-chain remodeling]
GO:0036152 [phosphatidylethanolamine acyl-chain remodeling]
GO:0044240 [multicellular organismal lipid catabolic process]
GO:0044281 [small molecule metabolic process]
GO:0045740 [positive regulation of DNA replication]
GO:0045944 [positive regulation of transcription from RNA polymerase II promoter]
GO:0046470 [phosphatidylcholine metabolic process]
GO:0046474 [glycerophospholipid biosynthetic process]
GO:0047498 [calcium-dependent phospholipase A2 activity]
GO:0048146 [positive regulation of fibroblast proliferation]
GO:0050482 [arachidonic acid secretion]
GO:0050714 [positive regulation of protein secretion]
GO:0050778 [positive regulation of immune response]
GO:0050830 [defense response to Gram-positive bacterium]
GO:0051092 [positive regulation of NF-kappaB transcription factor activity]
Show all
148 aa
16.4 kDa
Yes 0
PLA2G1B-002
ENSP00000413594
ENST00000423423
Q9BS22 [Direct mapping]
Phospholipase A(2)
Show all
   MEMSAT3 predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
RAS pathway related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004623 [phospholipase A2 activity]
GO:0005509 [calcium ion binding]
GO:0005576 [extracellular region]
GO:0016042 [lipid catabolic process]
Show all
70 aa
7.6 kDa
Yes 0
PLA2G1B-003
ENSP00000447233
ENST00000549767
F8W062 [Direct mapping]
Phospholipase A(2)
Show all
Predicted intracellular proteins
RAS pathway related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004623 [phospholipase A2 activity]
GO:0005509 [calcium ion binding]
GO:0005576 [extracellular region]
GO:0006644 [phospholipid metabolic process]
GO:0016042 [lipid catabolic process]
Show all
119 aa
13.2 kDa
No 0

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