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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:57.9TPM
GTEx:29.4RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Low
Neuronal cells:Medium
Neuropil:Not detected
 

Antibody staining

Antibody HPA042250

 

Endothelial cells

Low  

Glial cells

Low  

Neuronal cells

Medium  

Neuropil

Not detected  
 
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

57.9

N/A Male, age 5
Sample 1
TPM: 61.7
overview Female, age 40
Sample 2
TPM: 70.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 42.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

29.4

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 30.7
Samples: 114

Max RPKM: 41.4
Min RPKM: 17
Std RPKM: 4.2
Median RPKM: 31
GTEX-145MG-3026-SM-5RQJA 41.4
GTEX-13NYB-3026-SM-5IJD7 39.6
GTEX-14BMV-3026-SM-5S2PQ 38.7
GTEX-T5JC-2426-SM-3NMDB 38.3
GTEX-Y111-2726-SM-4TT3N 37.6
GTEX-ZE7O-3126-SM-5HL5X 37.4
GTEX-ZVT3-3026-SM-5E43N 37.1
GTEX-Z93S-2926-SM-57WB9 37.0
GTEX-13OW6-3026-SM-5J2MI 36.3
GTEX-Q2AG-2926-SM-2HMJ3 36.2
GTEX-145MF-2726-SM-5O995 35.9
GTEX-13VXU-2926-SM-5LU5C 35.8
GTEX-T6MN-2626-SM-32PMQ 35.8
GTEX-WVLH-3026-SM-3MJG9 35.8
GTEX-13SLX-3126-SM-5S2Q5 35.6
GTEX-YJ89-3026-SM-5IFJI 35.4
GTEX-144GL-3026-SM-5Q5CW 35.2
GTEX-12126-1026-SM-5P9JJ 34.9
GTEX-11GSO-2926-SM-5HL73 34.8
GTEX-12ZZX-2926-SM-5GCOQ 34.8
GTEX-11OC5-0726-SM-5P9JK 34.5
GTEX-13FLW-1426-SM-5K7YE 34.5
GTEX-13OW8-2826-SM-5L3GC 34.2
GTEX-Y8DK-0826-SM-4TT3T 34.2
GTEX-1313W-3126-SM-5LZUI 33.9
GTEX-ZZPT-3026-SM-5GZXH 33.5
GTEX-ZUA1-3026-SM-59HJC 33.4
GTEX-12WSD-3126-SM-5HL7P 33.3
GTEX-11NV4-2126-SM-5N9DS 33.1
GTEX-147GR-3026-SM-5S2ML 33.1
GTEX-12ZZY-3026-SM-5GCOU 32.9
GTEX-R55F-1326-SM-5S2V4 32.9
GTEX-WWYW-3126-SM-3NB39 32.9
GTEX-117XS-3026-SM-5N9CA 32.8
GTEX-14ASI-3026-SM-5S2PN 32.8
GTEX-WL46-2926-SM-3LK82 32.8
GTEX-X585-3026-SM-46MWF 32.8
GTEX-WHSE-3026-SM-3P5ZH 32.7
GTEX-X4XX-3026-SM-3NMB2 32.7
GTEX-1399T-3026-SM-5KLZC 32.6
GTEX-13QIC-2926-SM-5J2NF 32.6
GTEX-RNOR-2326-SM-2TF4I 32.6
GTEX-T2IS-3026-SM-32QPM 32.6
GTEX-131XW-3126-SM-5LZUC 32.2
GTEX-11GS4-3126-SM-5A5LH 32.0
GTEX-12WSC-3026-SM-5GCNF 32.0
GTEX-13OW7-3026-SM-5L3GY 32.0
GTEX-ZYFD-3026-SM-5E44C 32.0
GTEX-13S7M-3126-SM-5RQJQ 31.9
GTEX-11ONC-2926-SM-5P9JM 31.8
GTEX-12ZZW-2926-SM-5LZUP 31.8
GTEX-13X6J-3026-SM-5Q5CU 31.4
GTEX-12ZZZ-3026-SM-5BC67 31.3
GTEX-WZTO-2926-SM-3NM9I 31.3
GTEX-ZAK1-3026-SM-5S2MJ 31.3
GTEX-11DXY-3226-SM-5GIDE 31.2
GTEX-YFC4-3126-SM-5PNV6 31.1
GTEX-11PRG-2926-SM-5987A 30.9
GTEX-13FXS-3126-SM-5J2NN 30.9
GTEX-13O3O-3126-SM-5KM3H 30.9
GTEX-11EMC-3226-SM-5EGKW 30.8
GTEX-1192X-3126-SM-5N9BY 30.7
GTEX-11WQK-3026-SM-5EQL6 30.7
GTEX-13FHO-3026-SM-5J1O9 30.7
GTEX-13O3Q-2926-SM-5KM45 30.7
GTEX-11TTK-2926-SM-5PNYP 30.6
GTEX-11GSP-3226-SM-5986O 30.5
GTEX-11NUK-2926-SM-5A5MD 30.3
GTEX-11DXW-1126-SM-5H12Q 30.0
GTEX-XOTO-3026-SM-4B65M 30.0
GTEX-145LS-3126-SM-5Q5BY 29.9
GTEX-13FHP-3026-SM-5IJBS 29.8
GTEX-13PL6-3126-SM-5LUAR 29.7
GTEX-1117F-3226-SM-5N9CT 29.6
GTEX-144FL-3026-SM-5O99C 29.6
GTEX-131YS-3126-SM-5KLYT 29.4
GTEX-13OVH-3026-SM-5MR4N 29.2
GTEX-TSE9-3026-SM-3DB76 29.2
GTEX-XLM4-3026-SM-4AT6L 29.0
GTEX-13JUV-2926-SM-5LZX7 28.8
GTEX-13PVQ-3026-SM-5SI93 28.8
GTEX-145MH-3026-SM-5Q5DZ 28.6
GTEX-111FC-3126-SM-5GZZ2 28.4
GTEX-11EI6-3026-SM-5GZZO 28.4
GTEX-11ZUS-2926-SM-5FQSL 28.2
GTEX-1445S-3026-SM-5O9BR 28.2
GTEX-QDT8-2926-SM-32PKC 28.0
GTEX-13OVJ-2826-SM-5L3GW 27.7
GTEX-132Q8-3026-SM-5PNVG 27.6
GTEX-13JVG-3126-SM-5L3FH 27.5
GTEX-QVUS-2826-SM-3GADB 27.4
GTEX-OXRN-2426-SM-2I5EQ 27.2
GTEX-12WSH-3026-SM-5CVNI 27.1
GTEX-12WSA-2926-SM-5EQ4D 26.5
GTEX-RU72-3026-SM-5SI7Y 26.5
GTEX-139T8-1026-SM-5J2MC 26.4
GTEX-1128S-2726-SM-5H12C 26.3
GTEX-14A5I-2926-SM-5Q5CQ 26.3
GTEX-ZAJG-3126-SM-5HL9J 25.8
GTEX-NPJ8-1526-SM-2D7VU 25.6
GTEX-QMR6-1426-SM-32PLA 25.6
GTEX-13X6K-2926-SM-5Q5D5 24.8
GTEX-PWO3-0926-SM-2I5EY 24.8
GTEX-13G51-3026-SM-5IJB8 24.3
GTEX-QVJO-1426-SM-2S1QY 24.3
GTEX-13NYC-2826-SM-5K7WR 24.0
GTEX-NPJ7-2726-SM-2I3FT 24.0
GTEX-UTHO-3026-SM-3GAFB 24.0
GTEX-PVOW-2526-SM-2XCF7 23.9
GTEX-13NYS-3126-SM-5KLYV 23.3
GTEX-11O72-2926-SM-5BC4V 22.2
GTEX-13IVO-2926-SM-5L3CZ 21.7
GTEX-N7MT-1126-SM-5SI7V 21.4
GTEX-11OF3-2926-SM-5HL78 17.0
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 28.0
Samples: 108

Max RPKM: 55.1
Min RPKM: 17.8
Std RPKM: 4.7
Median RPKM: 28.5
GTEX-12WSD-0011-R10b-SM-5GU79 55.1
GTEX-12ZZY-0011-R10b-SM-5HL7W 35.4
GTEX-Z93S-0011-R10a-SM-4RGNM 35.1
GTEX-147GR-0011-R10b-SM-5S2UM 34.7
GTEX-13OW6-0011-R10a-SM-5L3HE 34.4
GTEX-13FXS-0011-R10a-SM-5J2MA 34.0
GTEX-139TS-0011-R10a-SM-5K7TU 33.7
GTEX-11WQC-0011-R10a-SM-57WCT 33.4
GTEX-1477Z-0011-R10b-SM-5S2RF 33.3
GTEX-YJ89-0011-R10a-SM-4SOK9 32.9
GTEX-13O3O-0011-R10a-SM-5LUA9 32.7
GTEX-T5JC-0011-R10A-SM-32PM2 32.7
GTEX-145MG-0011-R10a-SM-5PNWG 32.6
GTEX-13NYB-0011-R10a-SM-5KM43 32.5
GTEX-145LU-0011-R10a-SM-5PNWJ 32.0
GTEX-147F4-0011-R10b-SM-5S2WC 31.7
GTEX-131XH-0011-R10a-SM-5EGLJ 31.3
GTEX-13OW7-0011-R10a-SM-5L3H3 31.1
GTEX-ZUA1-0011-R10a-SM-51MT6 31.0
GTEX-13FLV-0011-R10b-SM-5LZZ2 30.9
GTEX-13N1W-0011-R10b-SM-5MR4H 30.9
GTEX-T6MN-0011-R10A-SM-32QP7 30.9
GTEX-14BIN-0011-R10a-SM-5S2UA 30.8
GTEX-X261-0011-R10B-SM-4E3JT 30.7
GTEX-12WSC-0011-R10a-SM-5GU57 30.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC 30.5
GTEX-N7MS-0011-R10A-SM-2HMJK 30.5
GTEX-ZDXO-0011-R10a-SM-4WWD8 30.3
GTEX-ZVZQ-0011-R10b-SM-51MRT 30.3
GTEX-14ASI-0011-R10b-SM-5S2VZ 30.2
GTEX-12WSE-0011-R10b-SM-5P9JV 30.0
GTEX-13JUV-0011-R10b-SM-5LZXR 30.0
GTEX-11GSP-0011-R10a-SM-5NQ7J 29.7
GTEX-RVPU-0011-R10A-SM-2XCAH 29.7
GTEX-ZVT3-0011-R10b-SM-57WB6 29.6
GTEX-13OVL-0011-R10a-SM-5L3GS 29.5
GTEX-13SLW-0011-R10a-SM-5S2UI 29.5
GTEX-12126-0011-R10b-SM-5BC6T 29.3
GTEX-12ZZX-0011-R10b-SM-5DUWK 29.3
GTEX-13FTZ-0011-R10b-SM-5KLZS 29.3
GTEX-ZV68-0011-R10a-SM-51MT7 29.3
GTEX-11WQK-0011-R10a-SM-5BC6R 29.1
GTEX-12WSF-0011-R10a-SM-5LZVH 29.1
GTEX-13QIC-0011-R10a-SM-5O9C7 29.1
GTEX-13X6I-0011-R10a-SM-5PNWI 29.1
GTEX-12WSM-0011-R10a-SM-5DUWV 29.0
GTEX-YFC4-0011-R10a-SM-4SOK5 29.0
GTEX-13X6J-0011-R10b-SM-5PNWA 28.9
GTEX-NL3H-0011-R10A-SM-2I3E9 28.9
GTEX-Y8DK-0011-R10A-SM-4SOK1 28.9
GTEX-13SLX-0011-R10a-SM-5P9HV 28.8
GTEX-13CZV-0011-R10b-SM-5LZYD 28.6
GTEX-13O3Q-0011-R10b-SM-5KM39 28.6
GTEX-13S7M-0011-R10b-SM-5PNZB 28.6
GTEX-1445S-0011-R10a-SM-5PNWB 28.4
GTEX-WVLH-0011-R10A-SM-3MJFM 28.1
GTEX-X585-0011-R10A-SM-46MUY 28.1
GTEX-13FLW-0011-R10b-SM-5LZZF 28.0
GTEX-13NYS-0011-R10a-SM-5MR4S 28.0
GTEX-NL4W-0011-R10A-SM-2I3DY 27.9
GTEX-13OW8-0011-R10a-SM-5L3H6 27.7
GTEX-Q2AG-0011-R10A-SM-2HMLA 27.7
GTEX-13RTJ-0011-R10b-SM-5O9CW 27.6
GTEX-131YS-0011-R10b-SM-5EQ5N 27.5
GTEX-12WSA-0011-R10b-SM-5P9ET 27.4
GTEX-11H98-0011-R10b-SM-5NQ98 27.3
GTEX-12WSH-0011-R10a-SM-5LZUS 27.3
GTEX-13NZA-0011-R10b-SM-5KM54 27.3
GTEX-ZAB4-0011-R10a-SM-4SOKH 27.2
GTEX-WZTO-0011-R10B-SM-4E3KB 26.9
GTEX-14753-0011-R10b-SM-5S2WE 26.8
GTEX-13G51-0011-R10b-SM-5LZYF 26.7
GTEX-X4XX-0011-R10B-SM-46MWO 26.7
GTEX-12ZZW-0011-R10b-SM-5HL9X 26.6
GTEX-N7MT-0011-R10A-SM-2I3E1 26.6
GTEX-13N2G-0011-R10a-SM-5MR34 26.5
GTEX-145MH-0011-R10b-SM-5PNUK 26.3
GTEX-S7SE-0011-R10A-SM-2XCDF 26.2
GTEX-1313W-0011-R10b-SM-5DUXA 26.1
GTEX-131XW-0011-R10a-SM-5DUVA 26.1
GTEX-13OVJ-0011-R10b-SM-5L3HT 26.0
GTEX-TSE9-0011-R10A-SM-3DB7O 26.0
GTEX-145LS-0011-R10a-SM-5PNUQ 25.5
GTEX-132Q8-0011-R10b-SM-5DUWZ 25.4
GTEX-WWYW-0011-R10A-SM-3NB35 25.4
GTEX-WL46-0011-R10A-SM-3MJFQ 25.1
GTEX-14BIL-0011-R10a-SM-5SI75 25.0
GTEX-13FHO-0011-R10b-SM-5J2MM 24.9
GTEX-P44H-0011-R10A-SM-2XCEK 24.9
GTEX-13JVG-0011-R10b-SM-5KM2P 24.5
GTEX-13X6K-0011-R10a-SM-5P9JR 24.5
GTEX-ZXG5-0011-R10a-SM-57WDD 23.9
GTEX-NPJ8-0011-R10A-SM-2YUMO 23.4
GTEX-OXRN-0011-R10A-SM-2I5GC 23.4
GTEX-11ZUS-0011-R10b-SM-5BC79 23.3
GTEX-XLM4-0011-R10A-SM-4AT5P 22.7
GTEX-ZF28-0011-R10a-SM-4WWEH 22.5
GTEX-QMR6-0011-R10A-SM-32PKO 22.3
GTEX-13QJC-0011-R10a-SM-5SI63 21.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 20.1
GTEX-X4EP-0011-R10B-SM-4QASJ 20.0
GTEX-OXRO-0011-R10A-SM-2I5EH 19.8
GTEX-XMD1-0011-R10A-SM-4AT4A 19.4
GTEX-QVUS-0011-R10A-SM-3GIK3 19.3
GTEX-NPJ7-0011-R10A-SM-2I3E5 18.5
GTEX-QDT8-0011-R10A-SM-32PKG 18.5
GTEX-13IVO-0011-R10a-SM-5LZY3 18.1
GTEX-QVJO-0011-R10A-SM-2S1QJ 17.8
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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