We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
RSL1D1
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:10.1RPKM
FANTOM5:63.0Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:High
 

Antibody staining

Antibody HPA043483

 

Glial cells

Low  

Neuronal cells

High  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

10.1

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 10.1
Samples: 117

Max RPKM: 17.3
Min RPKM: 3.9
Std RPKM: 2.5
Median RPKM: 10.6
GTEX-P44H-0011-R5A-SM-2XCEX 17.3
GTEX-T2IS-0011-R5A-SM-32QP4 15.7
GTEX-QVJO-0011-R5A-SM-2S1QM 15.2
GTEX-UTHO-0011-R5A-SM-3GIJD 14.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 14.1
GTEX-S7SE-0011-R5A-SM-2XCDA 14.1
GTEX-131YS-0011-R5b-SM-5K7YB 13.7
GTEX-13G51-0011-R5a-SM-5L3EB 13.7
GTEX-T6MN-0011-R5A-SM-32QPD 13.7
GTEX-139TT-0011-R5b-SM-5K7W8 13.1
GTEX-WWYW-0011-R5A-SM-3NB3E 13.1
GTEX-12WSF-0011-R5a-SM-5HL8K 13.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 12.7
GTEX-11H98-0011-R5b-SM-57WCF 12.6
GTEX-PVOW-0011-R5A-SM-32PL7 12.5
GTEX-WHSE-0011-R5A-SM-3P5ZO 12.5
GTEX-X585-0011-R5A-SM-46MVI 12.4
GTEX-12WSA-0011-R5b-SM-5GU5I 12.3
GTEX-13JUV-0011-R5a-SM-5LZY5 12.3
GTEX-N7MT-0011-R5a-SM-2I3G6 12.3
GTEX-TSE9-0011-R5A-SM-3DB7J 12.3
GTEX-XMD1-0011-R5A-SM-4AT47 12.3
GTEX-N7MS-0011-R5a-SM-2HMK8 12.2
GTEX-WVLH-0011-R5A-SM-3MJFW 12.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 12.1
GTEX-12WSB-0011-R5b-SM-5GU67 11.9
GTEX-12WSC-0011-R5b-SM-5CVNS 11.8
GTEX-1399T-0011-R5b-SM-5IJDK 11.8
GTEX-OHPN-0011-R5A-SM-2I5FF 11.8
GTEX-RU72-0011-R5A-SM-2TF6U 11.8
GTEX-ZUA1-0011-R5b-SM-51MTG 11.8
GTEX-11OF3-0011-R5a-SM-57WB4 11.7
GTEX-13NYS-0011-R5a-SM-5MR4D 11.7
GTEX-145LS-0011-R5a-SM-5SI65 11.7
GTEX-13OW6-0011-R5a-SM-5O9BK 11.6
GTEX-13X6K-0011-R5b-SM-5PNUE 11.6
GTEX-QMR6-0011-R5A-SM-32PKT 11.6
GTEX-11GSP-0011-R5a-SM-57WBE 11.5
GTEX-145MH-0011-R5a-SM-5P9JT 11.5
GTEX-R55E-0011-R5A-SM-2TC5N 11.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 11.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 11.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 11.3
GTEX-NL4W-0011-R5a-SM-2I3GD 11.3
GTEX-X4XX-0011-R5A-SM-46MWN 11.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 11.2
GTEX-1313W-0011-R5b-SM-5L3EP 11.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 11.1
GTEX-13X6I-0011-R5a-SM-5PNWW 11.1
GTEX-144GO-0011-R5a-SM-5PNUR 11.1
GTEX-132Q8-0011-R5a-SM-5IJDM 11.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 11.0
GTEX-13X6J-0011-R5b-SM-5PNWT 10.8
GTEX-RVPU-0011-R5A-SM-2XCAD 10.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 10.7
GTEX-14BIM-0011-R5b-SM-5S2RM 10.7
GTEX-NL3H-0011-R5a-SM-2I3GB 10.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 10.6
GTEX-13OVL-0011-R5b-SM-5L3FU 10.6
GTEX-WZTO-0011-R5B-SM-3NMC5 10.6
GTEX-14ABY-0011-R5b-SM-5SI7B 10.5
GTEX-13SLX-0011-R5a-SM-5O9BV 10.4
GTEX-13OW5-0011-R5b-SM-5L3FR 10.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 10.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 10.2
GTEX-RVPV-0011-R5A-SM-2TF69 10.2
GTEX-T5JC-0011-R5A-SM-32PLK 10.2
GTEX-13S7M-0011-R5b-SM-5P9HS 10.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 9.9
GTEX-13O3O-0011-R5b-SM-5KM44 9.9
GTEX-13VXU-0011-R5a-SM-5O9D7 9.9
GTEX-13CZV-0011-R5a-SM-5K7XA 9.4
GTEX-13FLV-0011-R5a-SM-5LZWT 9.4
GTEX-X261-0011-R5A-SM-3NMB4 9.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 9.4
GTEX-11NV4-0011-R5a-SM-5NQ88 9.3
GTEX-NPJ7-0011-R5a-SM-33HBK 9.2
GTEX-13OW7-0011-R5b-SM-5O9DM 9.1
GTEX-13NYB-0011-R5a-SM-5MR45 9.0
GTEX-13FXS-0011-R5b-SM-5LZYE 8.9
GTEX-OXRN-0011-R5A-SM-2I5EF 8.9
GTEX-ZXG5-0011-R5b-SM-57WBN 8.9
GTEX-Z93S-0011-R5b-SM-4RGNI 8.8
GTEX-13FLW-0011-R5a-SM-5LZX6 8.6
GTEX-12WSD-0011-R5b-SM-5CVNG 8.4
GTEX-13OVH-0011-R5b-SM-5KM4L 8.4
GTEX-WL46-0011-R5A-SM-3LK6V 8.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 8.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 8.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 8.2
GTEX-YFC4-0011-R5a-SM-4RGLR 8.2
GTEX-ZE7O-0011-R5a-SM-57WBO 8.0
GTEX-11WQC-0011-R5a-SM-5BC74 7.9
GTEX-13CIG-0011-R5b-SM-5L3F2 7.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 7.8
GTEX-1445S-0011-R5a-SM-5PNUS 7.6
GTEX-13JVG-0011-R5a-SM-5MR4O 7.5
GTEX-12ZZX-0011-R5a-SM-5HL89 7.4
GTEX-139TS-0011-R5b-SM-5J2MZ 7.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 7.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 7.3
GTEX-12WSH-0011-R5b-SM-5P9F3 7.2
GTEX-14BIN-0011-R5b-SM-5SI78 7.2
GTEX-ZV68-0011-R5a-SM-4YCDW 7.0
GTEX-XOTO-0011-R5A-SM-4B657 6.8
GTEX-ZVT3-0011-R5a-SM-51MSI 6.5
GTEX-144GL-0011-R5b-SM-5PNUJ 6.3
GTEX-13112-0011-R5b-SM-5DUV8 6.1
GTEX-YJ89-0011-R5a-SM-4V6GM 6.1
GTEX-139T8-0011-R5b-SM-5J1MO 6.0
GTEX-13FHP-0011-R5b-SM-5LZY2 5.6
GTEX-S7PM-0011-R5A-SM-3NM8G 5.6
GTEX-11UD1-0011-R5b-SM-5P9FP 5.5
GTEX-1477Z-0011-R5b-SM-5PNUO 5.2
GTEX-13CF2-0011-R5a-SM-5LZWS 5.1
GTEX-13NZA-0011-R5b-SM-5KM4K 4.0
GTEX-145MG-0011-R5b-SM-5S2VU 3.9
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

63.0

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 63.0
FF:10164-103B2 76 years, female 74.9
FF:10379-105H1 89 years, female 51.1

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.