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VAT1L

GENERAL INFORMATION

Gene name

 VAT1L

Gene description

 Vesicle amine transport 1-like

Protein class

 Plasma proteins
Predicted intracellular proteins

Predicted localization

 Intracellular

Number of transcripts

 1
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category
HPA:Group enriched (adrenal gland, cerebral cortex)
GTEx:Tissue enhanced (hypothalamus, cerebellum, caudate)
FANTOM5:Group enriched (caudate, retina, cerebellum)

Protein evidence

 Evidence at protein level

Protein expression

 Expression in processes in CNS and in peripheral nerves.

DATA RELIABILITY

Data reliability
description

 Pending external verification. Antibody staining in cells/structures not annotated, view images.

Reliability score

 Approved based on 2 antibodies.
HPA044061 , CAB046032
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RNA AND PROTEIN EXPRESSION SUMMARY
RNA expression (TPM) Protein expression (score)
Brain
Caudate
N/A
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Bronchus
N/A
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Vagina
N/A
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Pancreas

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW
Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Group enriched (adrenal gland, cerebral cortex)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (hypothalamus, cerebellum, caudate)
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Group enriched (caudate, retina, cerebellum)

GENE INFORMATION

Gene name

 VAT1L (HGNC Symbol)

Synonyms

 KIAA1576

Description

 Vesicle amine transport 1-like (HGNC Symbol)

Entrez gene summary

Chromosome

 16

Cytoband

 q23.1

Chromosome location (bp)

 77788530 - 77980107

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000171724 (version 83.38)

Entrez gene

 57687

UniProt

 Q9HCJ6 (UniProt - Evidence at protein level)

neXtProt

 NX_Q9HCJ6

Antibodypedia

 VAT1L antibodies

PROTEIN BROWSER
VAT1L-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
VAT1L-001
ENSP00000303129
ENST00000302536
Q9HCJ6 [Direct mapping]
Synaptic vesicle membrane protein VAT-1 homolog-like
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   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Plasma proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
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GO:0005515 [protein binding]
GO:0008270 [zinc ion binding]
GO:0016491 [oxidoreductase activity]
GO:0055114 [oxidation-reduction process]
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 419 aa
45.9 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.