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ZNF540

CANCER ATLAS

Gene description

 Zinc finger protein 540

Protein class

 Predicted intracellular proteins, Transcription factors

Protein evidence

 Evidence at protein level
Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY
HPA003444

GENE INFORMATION

Gene name

 ZNF540 (HGNC Symbol)

Synonyms

 DKFZp547B0714

Description

 Zinc finger protein 540 (HGNC Symbol)

Entrez gene summary

Chromosome

 19

Cytoband

 q13.12

Chromosome location (bp)

 37551406 - 37614097

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000171817 (version 83.38)

Entrez gene

 163255

UniProt

 Q8NDQ6 (UniProt - Evidence at protein level)

neXtProt

 NX_Q8NDQ6

Antibodypedia

 ZNF540 antibodies

PROTEIN BROWSER
ZNF540-001
ZNF540-002
ZNF540-003
ZNF540-004
ZNF540-005
ZNF540-008
ZNF540-009

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
ZNF540-001
ENSP00000467118
ENST00000589117
Q8NDQ6 [Direct mapping]
Zinc finger protein 540
Show all
Predicted intracellular proteins
Transcription factors
   Zinc-coordinating DNA-binding domains
Show all
GO:0000900 [translation repressor activity, nucleic acid binding]
GO:0003676 [nucleic acid binding]
GO:0003677 [DNA binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005515 [protein binding]
GO:0005622 [intracellular]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0006351 [transcription, DNA-templated]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0017148 [negative regulation of translation]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045892 [negative regulation of transcription, DNA-templated]
GO:0046872 [metal ion binding]
Show all
 628 aa
73.7 kDa 		No 0
ZNF540-002
ENSP00000324598
ENST00000316433
Q8NDQ6 [Direct mapping]
Zinc finger protein 540
Show all
Predicted intracellular proteins
Transcription factors
   Zinc-coordinating DNA-binding domains
Show all
GO:0000900 [translation repressor activity, nucleic acid binding]
GO:0003676 [nucleic acid binding]
GO:0003677 [DNA binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005515 [protein binding]
GO:0005622 [intracellular]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0006351 [transcription, DNA-templated]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0017148 [negative regulation of translation]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045892 [negative regulation of transcription, DNA-templated]
GO:0046872 [metal ion binding]
Show all
 660 aa
77.1 kDa 		No 0
ZNF540-003
ENSP00000465503
ENST00000586134
K7EK80 [Direct mapping]
Zinc finger protein 540
Show all
Predicted intracellular proteins
Show all
GO:0003676 [nucleic acid binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005622 [intracellular]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0046872 [metal ion binding]
Show all
 552 aa
64.3 kDa 		No 0
ZNF540-004
ENSP00000343768
ENST00000343599
Q8NDQ6 [Direct mapping]
Zinc finger protein 540
Show all
Predicted intracellular proteins
Transcription factors
   Zinc-coordinating DNA-binding domains
Show all
GO:0000900 [translation repressor activity, nucleic acid binding]
GO:0003676 [nucleic acid binding]
GO:0003677 [DNA binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005515 [protein binding]
GO:0005622 [intracellular]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0006351 [transcription, DNA-templated]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0017148 [negative regulation of translation]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045892 [negative regulation of transcription, DNA-templated]
GO:0046872 [metal ion binding]
Show all
 660 aa
77.1 kDa 		No 0
ZNF540-005
ENSP00000468113
ENST00000586792
K7ER55 [Direct mapping]
Zinc finger protein 540; Zinc finger protein 540, isoform CRA_b
Show all
Predicted intracellular proteins
Show all
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0006355 [regulation of transcription, DNA-templated]
Show all
 29 aa
3.5 kDa 		No 0
ZNF540-008
ENSP00000467667
ENST00000590588
K7EQ46 [Direct mapping]
Zinc finger protein 540
Show all
Predicted intracellular proteins
Show all
GO:0003676 [nucleic acid binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005622 [intracellular]
GO:0006355 [regulation of transcription, DNA-templated]
Show all
 100 aa
11.3 kDa 		No 0
ZNF540-009
ENSP00000466274
ENST00000592533
Q8NDQ6 [Direct mapping]
Zinc finger protein 540
Show all
Predicted intracellular proteins
Transcription factors
   Zinc-coordinating DNA-binding domains
Show all
GO:0000900 [translation repressor activity, nucleic acid binding]
GO:0003676 [nucleic acid binding]
GO:0003677 [DNA binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005515 [protein binding]
GO:0005622 [intracellular]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0006351 [transcription, DNA-templated]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0017148 [negative regulation of translation]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045892 [negative regulation of transcription, DNA-templated]
GO:0046872 [metal ion binding]
Show all
 660 aa
77.1 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.